Candidatus Methylopumilus turicensis: BN1209_0817
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Entry
BN1209_0817 CDS
T03844
Symbol
rimO
Name
(GenBank) putative 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbac03009
]
BN1209_0817 (rimO)
Enzymes [BR:
mbac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BN1209_0817 (rimO)
Ribosome biogenesis [BR:
mbac03009
]
Prokaryotic type
ribosomal protein modification factors
BN1209_0817 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
CEN55860
UniProt:
A0A0B7IU81
LinkDB
All DBs
Position
1:799441..800781
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AA seq
446 aa
AA seq
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MSSNNTPKVGFVSLGCPKAGSDAERILTQLRAEGYEISGTYEDADLVVVNTCGFIDSAVE
ESLDAIGEAINKNGKVIVTGCLGAKSGVVQTAHPSVLAVTGPHALEEVMTAVHANLPKPH
DPYVDLVPAQGVRLTPNHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPIGEVLNEAENLV
NAGVSEILVISQDTSAYGVDVKYRSGFWNGRPVKTRMTELTKSLSELGVWVRLHYVYPYP
HVDEVIPLMADGLILPYLDVPFQHASPRILKAMKRPASSENNLARIKAWRAICPDITVRS
TFIAGFPGETEEDFQMLLDFLEEAQLDRVGCFTYSAVDGASANALPDQVPEELKQERLAR
FMEVQELISAAKLQTKVGTMQTVLVDEIVQDVDGNIEAIGRTKADAPEIDGIVYLADAEG
LTPGDFVEVQIYDADGHDLWGGPPQD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaacaatacacctaaagttggcttcgtttcattaggttgcccgaaagctggc
tctgatgcagagcgtattctcacccaattgcgtgcagaaggctatgaaatatcgggcact
tatgaagacgctgatttggtcgtagtcaatacttgtggctttattgatagtgcggttgag
gagtcgctggatgccattggtgaggccattaataaaaatggcaaagtgattgtcacgggt
tgtttgggtgctaagagcggcgttgtgcaaacagcgcatcctagtgtgcttgctgtgacc
ggtccgcatgcgcttgaggaagtgatgactgcggtgcatgccaatttaccgaagcctcat
gacccatatgtagatttagtgcctgctcaaggcgtgcgtttaacacctaaccattatgct
tatttaaaaatctctgaaggctgtaatcaccgttgtagtttctgcattattcctagcatg
cggggcgatttggtgagtcgtcctataggtgaagtgctaaatgaggctgaaaaccttgtg
aatgcaggagtgtctgaaattttagtaatttctcaagatacttcagcatatggcgtagat
gtgaagtatagaagtggattctggaatggacgtccagtaaaaacgcgtatgactgagctc
acaaaatcattaagtgaattaggagtttgggtgcgattgcactatgtttatccttaccca
catgtggatgaagtcataccgttaatggcagacggcttgatattgccgtatttagatgtg
ccatttcagcacgccagtccgcgtattctgaaagcaatgaaacgccctgcaagtagtgaa
aataatttagcgcgtattaaagcttggcgtgccatttgtcctgatataacagtgcgcagc
acctttattgctggcttcccaggtgaaacggaagaggacttccaaatgctactcgacttt
ttagaagaggcgcaattggatagggtgggttgctttacctattctgcagtcgatggtgct
tcagctaacgcacttccggaccaagtgccagaagagcttaaacaagaacgtttagcgcgc
tttatggaagtgcaggaacttattagtgcagctaagttacaaactaaagtgggtactatg
caaacagtgctggttgatgagattgtgcaagacgttgatggcaatattgaagcgattggc
agaactaaagctgacgcgcctgaaattgacggcattgtgtatttggcggacgctgaaggt
ttaacgcctggtgatttcgttgaagtgcaaatctacgacgctgacgggcatgatttatgg
ggtggaccgcctcaggattga
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