Methanosarcina barkeri 3: MSBR3_0008
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Entry
MSBR3_0008 CDS
T04533
Name
(GenBank) RNA ligase, family
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
mbak
Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MSBR3_0008
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Motif
Pfam:
Lig_C
RNA_ligase
DNA_ligase_A_M
Pesticin_RB
LuxQ-periplasm
Motif
Other DBs
NCBI-ProteinID:
AKB80586
UniProt:
A0A0E3SH80
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Position
complement(8478..9650)
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AA seq
390 aa
AA seq
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MSREGNEKLDPQFIDKLASFLGFDKDRVQHLFEKNYLAQNWGKYEYIFRFDKEISHIERG
TVIYEKDGSFEIIMGFPKIRRAMVLDPTIKKHFSGLEKVAVEEKMNGYNVRIAIAKDEIL
AITRSGYICPYTTQKAKEKLNLKFFDDFPELVLYGEMIGPDNPYVPKDIYGIESVEFYIF
DIREKNSGKPLTISRKQEILEKYGFFQVKFFKKIPMETAAEEIRKIIRELGEKEHEGVVI
KDPKMVLSPLKYTSSQSNCSDLRHAFKFYNETGRDYMLSRIVREGFQTVEWNEDKTEFEK
RCMQLGKSILDPLRESIQNVKNGQRLYEEARIRVKDLKTAADFEDYLKRLGIDAIFEEPQ
LVGEEYLIIIKKINKSTNDKTQAIWQGETW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagaggggaacgagaagctagatcctcaatttatagataagcttgccagtttt
ctgggatttgataaagacagagttcagcacctttttgagaagaactatctagcccagaat
tggggaaaatatgaatacatattccgtttcgataaggagatctcccatatcgaaagagga
accgtgatttatgagaaagacggttctttcgaaatcattatgggtttcccgaaaatcagg
agagccatggtattggaccccacgattaaaaagcacttcagcggccttgaaaaagtagct
gtggaagaaaaaatgaatggatataacgtccgcatagcaattgcaaaagacgaaattctc
gcaatcactcggagcgggtatatctgcccttatacaactcaaaaggcaaaagaaaaatta
aatttgaaattttttgatgatttccctgaacttgtactttatggagaaatgataggcccg
gacaatccttatgttccaaaagatatctatggcattgagtcggtagagttttacatcttt
gatattcgggagaaaaatagcggtaagcctcttacaataagccgaaaacaagaaattctg
gaaaaatatggcttttttcaggtaaaattcttcaaaaaaattcctatggaaactgctgct
gaagaaatcagaaaaattatccgggaacttggagaaaaagaacatgaaggcgtcgtaata
aaggatccgaaaatggttctttctccgttaaaatatacttcttcccagagtaattgctcg
gacctcaggcatgcctttaaattttataatgagaccggcagagattatatgctttcccgg
attgttagagaaggttttcagacagttgaatggaacgaggacaagaccgagtttgaaaaa
cgctgcatgcagctaggaaaaagtatactggatcctcttagagaatccatccaaaatgtg
aaaaatggccaaaggttatatgaggaagcaaggatccgagtaaaggatttaaaaactgca
gcagattttgaagattatcttaaaagactcgggatagatgcaatttttgaagaacctcag
ttagtaggggaagagtatctgataattataaaaaaaataaacaaaagtaccaacgataaa
actcaagcaatctggcagggtgaaacctggtaa
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