Methanosarcina barkeri 3: MSBR3_0844
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Entry
MSBR3_0844 CDS
T04533
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak00730
Thiamine metabolism
mbak01100
Metabolic pathways
mbak01240
Biosynthesis of cofactors
mbak04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSBR3_0844
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MSBR3_0844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbak03016
]
MSBR3_0844
Enzymes [BR:
mbak01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MSBR3_0844
Transfer RNA biogenesis [BR:
mbak03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSBR3_0844
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Gene cluster
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Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AKB81422
UniProt:
A0A0E3SKG4
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Position
complement(1157176..1158393)
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AA seq
405 aa
AA seq
DB search
MVKEKTESDTLTHQETKTEVIIVRYGELALKSTGVRNWYEKILMKNIAAMLDSRDIPYFQ
IRREWGRIFIEATDFRAAEAAADVFGIVSTSPALVAEPTLESTASVCATLAKDLVLEGES
FAIRARRSGNHTFSSADIGRICGDAVWNALEKEGKHPRVNLSSPDKKIFVEVRQNLAYVY
LKTFKGVGGLPLGTQGSMVVLMSGGLDSPVAAWLMMKRGVMITPVYCSNSPYAEDAARER
AFDCIRQLQKWAPGHQFTTYEIPHGPNLKAFIDICKRKNTCLLCKRMMYREAYEVMKKEG
ASGIITGSSLGQVASQTAANMHAEIYQLAIPIYHPLIALDKTEIMDIARKIGTYDISNRS
AGSCTAVPEHPEIGAKYDLIVLEERKMDIETMVSNAMKAAKILKL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagaaaaaactgaatctgacactcttacccatcaggaaaccaagacagaagtt
attatagttcggtatggcgaacttgcccttaaaagtacaggagtccggaactggtatgag
aaaattcttatgaagaatattgcggcaatgctggattctcgagatattccatatttccag
atacggagggaatggggccgaatatttatcgaggctacggatttccgtgcggctgaagca
gctgctgatgtttttgggattgtctctacttctcctgcattggttgcagagcctactctt
gaaagtacagccagtgtatgtgctactctggccaaggacctggttttagaaggcgagtct
tttgccatcagggccagaagaagtggaaaccatactttttcttcggcggatataggtaga
atctgcggggatgctgtctggaatgctctggaaaaagaaggaaaacacccaagagttaac
ctgagttctcctgataagaaaatttttgttgaagtgaggcagaacctggcttacgtttac
ctgaaaacatttaaaggggtaggaggtcttcctctcggcacacagggaagtatggttgtt
ttaatgtccggtggtcttgactctccggttgcagcctggcttatgatgaagcgtggcgta
atgattacacctgtttattgcagtaactctccttatgcagaagacgcggcaagagaacgt
gcttttgactgcatccgacagctccagaagtgggctccggggcatcagtttacaacttat
gagattcctcatggtcctaatctcaaagcctttatagacatatgtaaacgaaaaaatacc
tgtcttctctgcaaacgcatgatgtacagggaagcttatgaggttatgaaaaaagaaggt
gcaagcggaattattaccggttcttccctgggacaggtagcttcccagactgctgccaat
atgcatgctgaaatttatcagcttgctatacctatttatcatcccttgattgcgttagac
aaaactgaaatcatggacattgcccgaaagattgggacctacgatatctccaatagatca
gcaggcagctgtactgctgtccctgagcatcctgaaataggggcaaagtacgaccttatc
gtacttgaggaaagaaaaatggatatcgagactatggtttccaatgctatgaaagcagca
aagatccttaaactctga
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