Methanosarcina barkeri 3: MSBR3_1412
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Entry
MSBR3_1412 CDS
T04533
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBR3_1412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbak03021
]
MSBR3_1412
Enzymes [BR:
mbak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBR3_1412
Transcription machinery [BR:
mbak03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBR3_1412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
DUF1451
Motif
Other DBs
NCBI-ProteinID:
AKB81990
UniProt:
A0A0E3WWV1
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All DBs
Position
1905422..1907236
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AA seq
604 aa
AA seq
DB search
MTKAKVFINGELVGTHDNPSELVDELRRMRRQGFISRQVNVALNNNTREVIINSDMGRAR
RPLLVVENGLPRVTEEHVEKIRNKEINFDDLVKEGCIEYLDAEEEENAYIGLYEADLTPD
HTHMEIDPELILGISTGMVPYPEHNASPRNTMGAAMIKQCIGVATANQKLRPDTRAHVLH
YPQRAMTKTRTSQAIGFDDRPAGQNFVVAILSYEGYNIEDALIFNKGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEFRGARSAEAYANLDTDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSDFGIAVEQRRESSVTMRSNETGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTEAGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVNATAFSGENEEDLREALKKHGFAHTGKEIFYDGATGKMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATYDKQRNVAFCSTCGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLKL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcaaaagtattcataaacggggagcttgtcgggacccatgataacccttct
gagcttgtagacgagctaagaaggatgaggcggcaggggttcatatccagacaggttaat
gtcgctcttaacaacaacacaagagaagtaattataaactccgatatgggaagagcaaga
agaccacttttagttgtggagaacggacttcccagggtaactgaagagcatgtcgagaaa
attaggaacaaagaaatcaactttgatgacctggtaaaagaaggctgtatagagtatctt
gatgccgaagaagaggaaaatgcctatatcggactctatgaggctgaccttactccagat
cacactcacatggagattgatcctgaacttattctcggaatctctaccggaatggttcct
tatcctgagcataatgcctctccgcgtaataccatgggcgcagccatgattaagcagtgt
atcggagttgcaactgcaaaccagaagctcagacctgatacacgagcacatgtgctccac
tatcctcagagggcaatgaccaagacaagaacctcgcaagcaataggttttgacgacaga
cctgcaggccagaacttcgttgtcgcaatcctgtcctatgaagggtataacattgaagac
gccctgattttcaataaaggctcaattgaaagaggtcttgggagaagtcacttcctcaga
accttcgaaggagaagaacgaaggtatccaggtggccaggaagataagtttgagattcct
gactccgaattccgtggagcacgcagtgcagaagcctatgcaaacctggatacggacgga
cttgtaaaccccgaaactccggttggtcccaacgacgtacttatcggaaaaaccagtcca
ccaaggttccttgaagaaccgtcggacttcggaattgcagtcgagcagaggagagaaagc
tcggtaacaatgcggtcaaatgaaaccggaattgttgacacggttatcctgaccgaatcc
attaacggtacccggcttgcgaaagtaaaggtaagggacgaaagaattcctgatattggg
gacaaattcgcttcaaggcacgggcaaaaaggagttatcggcctgaaagtcccgattgca
gatatgccgtttacggaagccggcctgaccccggatctgatgattaacccacatgcaatt
ccttcccgtatgacagtcgggcacgttctggaaatgattggcggaaaagtaggttccatg
gaaggcagaagagtcaatgcaacagctttctccggagaaaacgaagaagacctcagagaa
gccctgaaaaagcatgggtttgcccataccggaaaagaaattttctacgatggagcaacc
ggcaaaatgattcctgcagatgtctttgttggggttattctctaccagaaactgcaccat
atggttacttcaaagatgcatgcgcggtctcgcggacctgtacaggtacttacccgccag
ccaaccgaaggccgagccagagaaggtggtctcagattcggagaaatggaacgtgatgtg
ctggtagggcacggagctgccatgtcgctaaaagaaaggctgctcgatgagtcggacaag
gttgtggaacttgtctgttctcactgcggaatgattgcaacatatgacaagcagcggaat
gtcgctttttgctcaacctgcggagctgacacggatatatatcctgttgagatgagctat
gcattcaagttgctgctggacgaaatcaaatctctgggagttgctcccaggcttaaactt
gaagatgcggtatga
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