Methanosarcina barkeri 227: MSBR2_0311
Help
Entry
MSBR2_0311 CDS
T03914
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mbar
Methanosarcina barkeri 227
Pathway
mbar00730
Thiamine metabolism
mbar01100
Metabolic pathways
mbar01240
Biosynthesis of cofactors
mbar04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSBR2_0311
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MSBR2_0311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbar03016
]
MSBR2_0311
Enzymes [BR:
mbar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MSBR2_0311
Transfer RNA biogenesis [BR:
mbar03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSBR2_0311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AKB56827
UniProt:
A0A0E3QYK5
LinkDB
All DBs
Position
412332..413642
Genome browser
AA seq
436 aa
AA seq
DB search
MTDNFNEIEAKPKADAYTSRENKHTPEDYIGNPDNPGSDPSSLKSEISSNVVIVRYGELA
LKSTGVRNWYEKILMKNIAAMLDSRDIPYSQIRREWGRIFIETKDFRAAEAAADVFGIVS
TSPALTTEPTLESAASVCATLAKDLVLEGESFAVRARRSGNHPFSSVDIGRTCGDAVWSA
LEKKGRHPKVDLSSPDKEVFVEMRQNLAYVYLETFKGVGGLPLGTQGSMVVLMSGGLDSP
VAAWLMMKRGVMIIPVYCNTSPYAENAARERAFECIRQLQKWAPGYQFKTYELPHGPNLR
TFIDICNRKNTCLLCKRMMYREAYEVMKKEGANGIITGSSLGQVASQTAANMYAEIYQLA
IPIYHPLIAFDKTEIIDIARKIGTYDISSRPAGSCTAVPERPEIGANYDLVVTEEQKMDI
KTMVFNAMKAAKVLKL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacagataatttcaatgagatcgaagcaaagcctaaggctgatgcctatacctcgaga
gaaaacaagcatacgccggaagattacatcggaaatccagataaccctggttccgacccc
tcttctttaaagtcggaaatttcatcgaatgtagtcatagttcggtatggcgaattagcc
cttaaaagtacaggagttcgaaactggtatgagaaaattcttatgaagaatattgcggca
atgctggattctcgagatattccatattcccagatacgtagggaatggggccgaatattc
atcgagactaaggatttccgtgcggctgaagcagctgctgacgtttttggaattgtctct
acttctcctgcattgacaactgagcctactcttgagagtgcagccagtgtatgtgctact
ctggctaaggacctggttttagaaggcgaatcttttgcggtcagggctagaagaagcgga
aaccatcctttttcttcggttgacataggcagaacctgtggagatgctgtctggagtgct
ctggaaaaaaaaggaaggcatcctaaggttgacctgagttctcctgataaggaagttttc
gtcgaaatgcggcaaaatctcgcttacgtctatctggaaacattcaaaggagtagggggt
cttcctctcggcacgcaaggaagtatggttgttttaatgtccggcgggcttgactctccg
gttgcagcctggcttatgatgaaacgcggagttatgattattccggtatactgcaatact
tcaccctatgccgagaatgccgcaagagaacgtgcttttgaatgtattcgccagctccag
aaatgggctccagggtatcagtttaagacatatgagcttcctcacggtcccaatcttcgg
acctttatcgacatctgcaaccgaaaaaatacctgtcttctctgcaaacgcatgatgtac
agggaagcctatgaggttatgaaaaaagaaggtgcaaacggaattattaccggttcttcc
ctgggtcaggtagcttcccagactgctgccaatatgtatgctgaaatctatcagcttgct
atccctatttaccatcctttgattgcctttgataagacagagataatagacattgcccgc
aaaatcggaacctatgatatttccagtcgacccgcaggcagttgcactgctgtgcctgag
cggcctgaaataggagcaaactacgaccttgtagtaactgaagaacaaaaaatggatatc
aagactatggttttcaatgctatgaaagcagcaaaagtccttaaactctga
DBGET
integrated database retrieval system
