Candidatus Methylopumilus planktonicus: BN1208_0132
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Entry
BN1208_0132 CDS
T03869
Symbol
kdsD
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00540
Lipopolysaccharide biosynthesis
mbat01100
Metabolic pathways
mbat01250
Biosynthesis of nucleotide sugars
Module
mbat_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BN1208_0132 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mbat01005
]
BN1208_0132 (kdsD)
Enzymes [BR:
mbat01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
BN1208_0132 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
mbat01005
]
Lipid A
BN1208_0132 (kdsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
CEZ19028
UniProt:
A0A0D6EUA9
LinkDB
All DBs
Position
1:complement(128112..129092)
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AA seq
326 aa
AA seq
DB search
MTKTSSKNTLERARQVLEIEAQEILSLANRLDDHFVNAVQLILHCDGRVVVSGMGKSGHI
GRKLASTFASTGTPSFFMHPAEASHGDLGMITSNDVVIFLSNSGKSDELLSILPVIKRIG
AKIISITGNSDSELARESKIHLSAHVSQEACPLGLSPTASSTASLALGDALAICVLDQRA
FTAEDFARSHPGGSLGKRQVVRVRDIMRDLDKVPSIKEDALLSDAVLEISLKGLGFTAIV
NPHSEPIGIFTDGDLRRQLSKKIDYEKQSIREIMNKNPKTIFDDQIIIDAINLMDFNKIN
GILVVNRENKLVGAFNMHDLFKAKVI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgactaagacatcatcaaaaaatactcttgaacgcgctcgccaagtccttgaaattgaa
gcacaagaaatcttatctttagcgaataggcttgatgatcatttcgtcaacgctgttcaa
ctcattttacattgtgatggcagagttgtggtaagtgggatgggcaaatcggggcatatc
ggaagaaaattagcctctactttcgcaagcactggcaccccaagcttctttatgcaccct
gcagaggcaagtcatggcgatttaggcatgattacatctaatgatgtagtcatttttcta
tcaaattctggtaagagcgatgagcttttatctatcctaccagtcataaaaagaatcggc
gcaaaaattatttcaattacaggcaatagtgattctgagcttgcaagggaatccaaaatt
catttaagcgctcatgtatctcaagaggcctgccctttagggctttcccctaccgctagc
tcaacagcatctcttgctttaggagatgcattagccatttgtgttcttgatcaaagagca
tttaccgctgaagattttgctcgatcgcatccaggcggcagtttgggcaaaagacaagtt
gtgcgggtgcgagacattatgagagaccttgataaagtgccttccatcaaagaagatgca
ttactttctgatgcagtgcttgagatatctcttaagggcttaggctttacagcaatagtt
aatcctcattccgagcctattggcatatttactgatggcgatttaagaagacagctttct
aaaaaaatagattacgaaaaacagtccattagagaaattatgaacaaaaatcctaagaca
atatttgatgatcaaatcattattgatgcaatcaacttaatggatttcaataaaattaat
ggcattcttgtggttaatagagagaataaattagtaggtgcttttaatatgcatgatctc
tttaaagcgaaagttatttga
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