Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2: BCG_0271c
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Entry
BCG_0271c CDS
T00463
Symbol
gabD1
Name
(GenBank) Probable succinate-semialdehyde dehydrogenase [nadp+] dependant (ssdh) gabD1
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
mbb
Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
Pathway
mbb00250
Alanine, aspartate and glutamate metabolism
mbb00310
Lysine degradation
mbb00350
Tyrosine metabolism
mbb00650
Butanoate metabolism
mbb00760
Nicotinate and nicotinamide metabolism
mbb01100
Metabolic pathways
mbb01120
Microbial metabolism in diverse environments
Module
mbb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BCG_0271c (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BCG_0271c (gabD1)
00310 Lysine degradation
BCG_0271c (gabD1)
00350 Tyrosine metabolism
BCG_0271c (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BCG_0271c (gabD1)
Enzymes [BR:
mbb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BCG_0271c (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BCG_0271c (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BCG_0271c (gabD1)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
LuxC
fvmX5
Acetyltransf_6
Motif
Other DBs
NCBI-ProteinID:
CAL70255
UniProt:
A1KF54
LinkDB
All DBs
Position
complement(307635..309170)
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AA seq
511 aa
AA seq
DB search
MRSVTCSATLVLPVIEPTPADRRPRHLLLGSAGHVSGRLDTGRFVQTHPAKDVSVPIATI
NPATGETVKTFTAATDDEVDAAIARAHRRFADYRQTSFAQRARWANATADLLEAEADQAA
AMMTLEMGKTLAAAKAEALKCAKGFRYYAENAEALLADEPADAAKVGASAAYGRYQPLGV
ILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTL
LVSSGAVEAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADL
DAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGP
LATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGP
VASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFINGMTVSYPEL
PFGGVKRSGYGRELSAHGIREFCNIKTVWIA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcggtgacatgttccgccacgctggtcctgcccgtgatagagcccaccccagcc
gataggaggccccgacacctcctgctcgggagcgctggccacgttagtggcaggctggac
accggacgatttgtgcaaacccacccagcaaaggatgtcagcgtgcccatcgccaccatc
aacccggctaccggcgaaacagtcaagacattcactgcggcgaccgatgacgaagtcgac
gcggcaatagcccgggcccaccggcggttcgccgactaccgccagaccagcttcgcccag
cgcgcccggtgggccaatgccaccgccgacttgctggaagccgaggccgaccaggccgcc
gcgatgatgacgctcgagatgggcaagacgctggccgcggccaaagccgaggcactgaag
tgcgccaagggttttcgctactacgccgaaaacgccgaggcgttgctggccgacgaaccc
gccgatgcggccaaggtcggggcgtcggcggcctacggccgataccagccgctcggggtg
atcctggcggtgatgccatggaacttccccctgtggcaagcggttcggttcgccgcaccg
gcactgatggccggaaacgtcggcctgctcaagcacgcgtcgaacgtgccgcaatgcgcg
ctgtacctggccgacgtcatcgcccgaggcggcttcccggacggctgcttccagacgttg
cttgttagctcgggagccgtcgaagccatcctgcgtgatccccgggtcgcggcggccacg
ctgaccggaagcgagccggccggccaatcggtgggcgctatcgccggtaacgagatcaag
ccgaccgtgctcgagctcggcggcagcgacccgttcatcgttatgccgtcggccgatctg
gacgccgcggtcagcaccgccgtcaccggccgggtgcagaacaacggccaatcctgcatc
gccgccaagcggttcatcgtccacgccgacatttacgacgatttcgtcgacaagttcgtc
gcgcggatggcggcgttacgggtcggcgacccgaccgacccggacaccgacgtgggcccg
ctggccaccgagcagggccgcaacgaggttgccaagcaagtcgaggatgctgccgcggcg
ggcgcggtgatccggtgcggcggaaagcgtctcgaccggccgggctggttctacccgccg
accgtgatcaccgacatctccaaggacatggctctctacaccgaggaggtcttcggtccg
gtcgcctcggtgttccgcgcggcgaacatcgacgaggccgtcgagatcgccaacgccacc
accttcgggctgggatccaacgcctggacccgcgacgagaccgagcaacgacgcttcatc
gacgacatcgtggcgggccaggtttttatcaacggcatgacggtgtcctatcccgaattg
ccgttcggcggggtcaagcgctcgggctatggccgggaactgtccgcacacgggatacgc
gagttctgcaacatcaagaccgtctggatcgcctag
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