Candidatus Izimaplasma bacterium HR1: KQ51_00346
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Entry
KQ51_00346 CDS
T03291
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
mbj
Candidatus Izimaplasma bacterium HR1
Pathway
mbj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KQ51_00346 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbj03021
]
KQ51_00346 (rpoE)
03400 DNA repair and recombination proteins [BR:
mbj03400
]
KQ51_00346 (rpoE)
Transcription machinery [BR:
mbj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KQ51_00346 (rpoE)
DNA repair and recombination proteins [BR:
mbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KQ51_00346 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
CelTOS
Motif
Other DBs
NCBI-ProteinID:
AIO18234
UniProt:
A0A088TL15
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All DBs
Position
complement(315317..315961)
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AA seq
214 aa
AA seq
DB search
MKAQKSLIDAAVELLEVEKKPYNLYQLFDKVTKGQKFSEDAKADAVTKFYTDLTTSAKFV
YTGDNQWDLKANQKIELWEKDGSFYKEYTKVDLPDEYKPAPKPKKATKTKTKAKPKAKAK
VVEVVEPVIEKVVEPVIEKVVEPVIEKTVEPVIEPVVESVAKPDDKKAAVPVTDESGKSE
VVETYEEEVFEEFEDFDEDKYNEYMDTYEDQYKD
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacaaaaatcattaattgatgcagctgtcgagttgttagaggtagagaagaaa
ccctataatttatatcaattgtttgataaagtaacaaagggccaaaaatttagcgaggat
gctaaagcagatgccgttactaaattttatactgatttaactacatcagctaaatttgta
tacacaggggataatcaatgggatttaaaagctaatcagaaaatagaactatgggaaaaa
gacggttcattctataaagaatatactaaggttgacttacctgatgaatacaaacctgca
ccaaaacctaaaaaagctactaaaacaaaaacgaaagctaagcctaaagccaaagccaaa
gtagtagaagtagtagaaccagtaattgaaaaagtagtagaaccagtaattgaaaaagta
gtggagccagtaattgaaaaaacagtagaaccagttatagaaccggttgttgaatcagtt
gctaaaccagatgataaaaaagctgcagtacctgttactgatgaatcaggtaaatctgaa
gtagttgaaacttacgaagaagaagtgtttgaagagtttgaagacttcgatgaagacaaa
tacaacgagtacatggatacatacgaggatcaatacaaggattaa
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