KEGG   Monosiga brevicollis: MONBRDRAFT_31053
Entry
MONBRDRAFT_31053  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mbr  Monosiga brevicollis
Pathway
mbr03020  RNA polymerase
mbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MONBRDRAFT_31053
  09124 Replication and repair
   03420 Nucleotide excision repair
    MONBRDRAFT_31053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbr03021]
    MONBRDRAFT_31053
   03400 DNA repair and recombination proteins [BR:mbr03400]
    MONBRDRAFT_31053
Transcription machinery [BR:mbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     MONBRDRAFT_31053
  RNA polymerase III system
   RNA polymerase III
     MONBRDRAFT_31053
  RNA polymerase I system
   RNA polymerase I
     MONBRDRAFT_31053
DNA repair and recombination proteins [BR:mbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MONBRDRAFT_31053
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 5887517
NCBI-ProteinID: XP_001742451
JGI: 31053
UniProt: A9UR01
LinkDB
AA seq 210 aa
MDDEAERYRLYKVWITLKQMCHDRGFRVTQEMMNMTFDTWNEIYGEYPRKELSFPVQKVD
DDNDGLFVFFPESPDVKVAAIKSLYDRLKSDNLRRAIIVYQRKVAPVAKSHIDILLKEDP
PYIVETFAEAELVYNVTRHHLVPHHEILKESEKQQLLERYCVSEDRLPQIQPNDPVCRYF
GAQKGQVLRIVRSSQTAGRYVTYRIVADIL
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaagctgaacggtatcgcttgtacaaagtctggatcaccctcaaacagatg
tgccatgaccgtggctttcgtgttacacaagagatgatgaacatgacctttgacacttgg
aacgaaatttacggcgaataccctcgaaaggagctatcgtttcccgtgcaaaaggtggac
gacgacaacgacggcttgttcgtcttctttcccgagtcacccgacgtcaaggtggccgcc
atcaagagcctgtacgatcgtttgaaaagcgacaatctgcgacgagccatcatcgtatac
cagcgcaaggtggcgcctgtggccaaatcgcatatcgacatcttgttgaaggaggaccca
ccgtacattgttgaaacttttgcagaggccgagctggtctacaacgtgacccgccaccat
ctggtcccacatcacgagattttgaaggagagcgagaaacagcaactgctggagcgctac
tgtgtgtccgaggaccgcctgccccagatccagcccaatgaccccgtgtgccgctacttt
ggcgcacaaaaaggacaggtattgcgcatcgtccgcagcagtcaaaccgcaggccgttat
gtcacctaccgcattgtcgccgatatcctttaa

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