Methanosarcina barkeri Wiesmoor: MSBRW_0028
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Entry
MSBRW_0028 CDS
T03839
Name
(GenBank) RNA ligase, family
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MSBRW_0028
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Motif
Pfam:
Lig_C
RNA_ligase
DNA_ligase_A_M
Pesticin_RB
Motif
Other DBs
NCBI-ProteinID:
AKB49281
UniProt:
A0A0E3LKC5
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Position
complement(7299..8471)
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AA seq
390 aa
AA seq
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MSREGNEEIDPQFIARLASFLGFNKERVQHLFEKNYLAQNWGKYEYLFRFDKEISHIERG
TVLYEKDGSFEIIMGFPKIRRAMVLDPTIKKHFNGLEKVAVEEKMNGYNVRIAIAKDEIL
AITRSGYICPYTTQKAKEKLNLKFFDDFPELVLYGEMIGPDNPYVPKDIYDIESVEFYIF
DIREKNSGKPLPIKRKHEILEKYGFFQVKFFKEIPLETAAEEIGKIIRELGEKEHEGVVI
KDPEMVLSPLKYTSSQSNCSDLRHAFKFYNETGRDYMLSRIVREGFQTVEWNEDKDEFEK
RCMQLGKSILGPLSESILSVKNGQRLYEEAKIRVRDLKTAAEFEDYLKRLGIDAIFEEPQ
LVGGEYLVIIKKINKSTNDKTQAIWQGEPW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagaggggaacgaggagatagatcctcaatttatagctagacttgccagtttc
ctgggatttaataaggaaagggttcagcacctttttgagaaaaactatcttgcccagaat
tggggaaaatatgaatatctgttccgtttcgataaggagatctcacatatcgaaagggga
accgtgctttatgagaaagacggttctttcgaaatcattatgggtttcccgaaaatccgg
agagccatggtactggatcccacaattaaaaagcactttaacggccttgaaaaagtggcc
gtggaagaaaaaatgaatgggtataatgtccgcatagcgattgcaaaagacgaaatcctt
gcaattacccggagcgggtatatctgcccttatacgactcaaaaagcaaaagagaagctg
aatctgaaattttttgacgatttccctgaacttgtactttatggagaaatgataggcccg
gacaatccttatgttccaaaagatatctatgacatcgagtcggtagagttttacatcttt
gatattcgggaaaaaaacagcggtaagcctcttccaataaaaaggaagcatgaaattctg
gaaaaatacggctttttccaggtaaagttcttcaaggaaattcccctagaaactgctgct
gaagaaataggaaaaatcatccgggaacttggagaaaaagaacatgaaggagtcgtaata
aaagatccggaaatggttctttctccgttaaaatatacctcttcccagagtaattgctcg
gatctcaggcatgcctttaagttttacaatgagaccggcagagactatatgctttcccgg
attgtcagagaaggttttcaaacagttgaatggaacgaagataaggatgagtttgaaaaa
cgctgcatgcagttagggaagagtatacttggccctcttagtgaatccatcctaagtgta
aaaaacggccagcgtttatatgaggaagcaaagatccgagtaagggatctaaaaactgca
gccgagttcgaagattatcttaaaagactcgggatagatgcaatttttgaagagcctcag
ttagtaggaggagagtatctggtaattataaaaaagattaataaaagtactaatgataaa
actcaagcaatctggcagggcgaaccatggtaa
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