Methanosarcina barkeri Wiesmoor: MSBRW_0987
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Entry
MSBRW_0987 CDS
T03839
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw00730
Thiamine metabolism
mbw01100
Metabolic pathways
mbw01240
Biosynthesis of cofactors
mbw04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSBRW_0987
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MSBRW_0987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbw03016
]
MSBRW_0987
Enzymes [BR:
mbw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MSBRW_0987
Transfer RNA biogenesis [BR:
mbw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSBRW_0987
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AKB50240
UniProt:
A0A0E3QJL1
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Position
1181395..1182705
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AA seq
436 aa
AA seq
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MTDNSNDIEARPKAGAHTSRESKHTPEDYIENPDNPGSGPSSLRPEIPPNVIIVRYGELA
LKSTGVRNWYEKILMKNIAAMLESRDIPYFQIRREWGRIFIETMDFRAAEAAADVFGIVS
TSPALTTEPTLESTASVCATLAKDLVLEGESFAVRARRSGNHPFSSVDIGRTCGDAVWSA
LEKKGKHPRVDLSSPDKEVFVEMRQNLAYVYLETFKGVGGLPLGTQGSMVVLMSGGLDSP
VAAWLMMKRGVMIIPVYCNTSPYAENAARERAFECIRQLQKWAPGHQFKTYELPHGPNLR
TFIDICNRKNTCLLCKRMMYREAYEVMKKEGASGIITGSSLGQVASQTAANMYAEIYQLA
IPIYHPLIAFDKTEIIDIARKIGTYDISSQPAGSCTAVPERPEIGANYDLVVTEEQKMDI
ETMVFNAMKAAKVLKL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaattccaatgatatcgaggcaaggcctaaggctggtgcccatacctcgaga
gaaagcaagcatacaccggaagattatattgaaaatccagataaccctggttcaggcccc
tcttctttaaggcctgaaatcccacctaatgtaatcatagttcggtatggcgaacttgcc
cttaaaagtacaggggttcggaactggtatgagaaaattcttatgaagaatattgcggca
atgctggaatctcgagatattccatatttccagatacgtcgggaatggggccggatattt
atcgagactatggatttccgtgcggctgaagcagctgctgacgtttttgggattgtctct
acttcccctgcattgacaactgagcctacccttgagagcacagccagtgtatgtgctacc
ctggctaaggacctggttttagaaggcgaatcttttgcggtcagggctagaagaagcggg
aaccatcctttttcttcggtggacataggcagaacctgcggagatgccgtctggagtgct
ctggaaaaaaaagggaagcatcccagagttgaccttagttctcctgataaagaagttttt
gtagaaatgaggcaaaatctcgcttacgtctatctggaaacatttaaaggagtagggggt
cttcctctaggcacacagggaagtatggttgttttaatgtccggtgggcttgactctccg
gttgcagcctggcttatgatgaaacgcggagttatgattattccggtatactgtaatact
tcgccctatgccgagaacgccgcaagagaacgcgcttttgaatgtattcgccagctccag
aaatgggctccagggcatcagtttaagacttatgaacttcctcacggccccaatcttcgg
acttttatcgacatctgcaaccgaaaaaatacctgtcttctctgcaaacgaatgatgtac
agggaagcctacgaggttatgaaaaaagaaggtgcaagtggaattattactggttcttcc
ctgggacaggtagcttcccaaactgctgccaatatgtatgctgaaatttatcagcttgct
attcctatttaccatcctttgattgcctttgataaaacagagataatagacattgcccgc
aaaatcggaacctatgatatttccagtcaacctgcaggcagttgcactgctgtgcctgag
cggcctgaaataggagcaaattatgaccttgtcgtaactgaagaacaaaaaatggatatc
gagaccatggttttcaatgctatgaaagccgcaaaagtccttaaactctga
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