Methanosarcina barkeri Wiesmoor: MSBRW_1040
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Entry
MSBRW_1040 CDS
T03839
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRW_1040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbw03021
]
MSBRW_1040
Enzymes [BR:
mbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRW_1040
Transcription machinery [BR:
mbw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRW_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AKB50293
UniProt:
A0A0E3QKC9
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All DBs
Position
1269996..1271591
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AA seq
531 aa
AA seq
DB search
MQHHIDSFNKFIDYGLQKIIDEQKIIETDIEDTYLKLGKIRVEHPVVKEADGAIEKLYPN
EARLRNLSYSGPLYLEMSVVKEGIESEPMEAKIGQLPIMVKSKICNLPGLSETEKVRYGE
DPLDPGGYFIIGGTERVVMTLEDLAPNKILVEYGERYGDTIEVAKVFSQKRGYRALVIVE
RGRKSLLEVSFPSISGRVFFITLMRALGIVTDEDIVNAVSSDPEIIKFMLENLEEAEVET
QDEAIEKIGARVAAGQAKEYQIKRANYVIDRYLFPHLGNDMKDRISKAHFLARMAESCFE
LALGKRSEDDKDHYANKRLKLAGDLMEDLFRVSFNRLARDIKYQLERANMRNRELNVATI
VRADVLTDRLQHPLATGNWVGGRTGVSQLLDRNDYISTLSHLRRVISPLSRAQPHFEARD
LHATQWGRLCPSETPEGPNCGLVKNFAEMVELSTGIEDIDGIKKILHDLNVERVVVKVPE
LPSKMKETLLDEFGEEIVEEYEEPSESESKFKDDEFYDYSDMDDSGSMFGD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaccatatagactcgtttaacaagtttatagactacgggctgcaaaaaatcata
gatgaacagaaaataatagaaaccgatatcgaggatacctacctcaaacttggaaaaatt
cgggtagagcatcctgtggtaaaggaagctgacggggcaatcgaaaaactttatcccaac
gaggcaaggctcaggaacctctcatactcaggccctctctacctcgaaatgagcgtggta
aaagagggaattgagtccgaaccaatggaagcaaaaataggacagctccctataatggtc
aaatctaagatctgtaaccttccaggacttagcgaaaccgaaaaagttcgctatggggaa
gatccacttgaccctgggggatatttcattatcggcggcaccgaaagggtggttatgacc
ctagaagatctcgctcctaacaaaattcttgtagagtatggggagaggtacggcgacact
atagaagttgcaaaggttttctcacagaaacgcggatacagagctctagtaatcgtagaa
agaggaagaaagtctctgctcgaggtttctttcccgtcgatttcaggccgagtattcttc
attactcttatgagagctcttgggattgtaactgacgaagatattgtaaatgcagtttca
agtgatcccgaaattataaagttcatgctggaaaaccttgaagaagccgaagtcgaaacc
caggacgaagcaatcgagaaaatcggggcccgggtcgctgcaggccaggctaaggaatac
cagataaaaagagcaaactatgttattgacaggtacctgtttccccatcttggaaacgac
atgaaagacagaatctccaaggctcacttcctggcaagaatggctgagtcctgtttcgag
ctggccctgggcaagcgttcggaagatgataaagaccactatgcaaacaaaagactgaaa
ctagctggagacctgatggaagacctcttcagggtatctttcaacaggcttgcaagagac
ataaaataccagctcgaacgcgcaaacatgagaaacagggagttaaatgtcgcaacaata
gtcagggccgatgtgttaactgaccgcctgcagcacccactggcaactggaaactgggtt
ggaggaagaacaggtgtgtcccaactccttgacagaaacgactatatctccacgctttct
catctgcgccgggtaatttcacctctttcacgagctcagcctcactttgaggcccgagac
ctgcatgcaacccagtggggaaggctttgcccttcggaaactcctgaaggtccaaactgt
ggtctggtgaaaaactttgccgagatggttgaactttcaacaggtatagaagatatcgat
gggattaagaaaatcctccatgacctgaacgtcgagcgcgtggttgtaaaggtaccggaa
ctcccgtccaaaatgaaagaaacattacttgatgagttcggagaagagattgttgaagaa
tacgaagagccttcggaaagcgaaagcaaattcaaagatgatgagttttacgattactca
gatatggacgattccggatcaatgttcggtgattga
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