Methanosarcina barkeri MS: MSBRM_0227
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Entry
MSBRM_0227 CDS
T03838
Name
(GenBank) 3-isopropylmalate dehydrogenase
KO
K07246
tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:
1.1.1.93
4.1.1.73
1.1.1.83
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00630
Glyoxylate and dicarboxylate metabolism
mby00650
Butanoate metabolism
mby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSBRM_0227
00650 Butanoate metabolism
MSBRM_0227
Enzymes [BR:
mby01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.83 D-malate dehydrogenase (decarboxylating)
MSBRM_0227
1.1.1.93 tartrate dehydrogenase
MSBRM_0227
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.73 tartrate decarboxylase
MSBRM_0227
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Motif
Pfam:
Iso_dh
LonB_AAA-LID
Motif
Other DBs
NCBI-ProteinID:
AKB53225
UniProt:
A0A0E3QRR9
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Position
complement(271911..273038)
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AA seq
375 aa
AA seq
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MTQYKIPVLPGDGIGPEIIAEGRKVIDAAGERFGFDVEWIEYPQGADHYLETGELISEDT
LKELSGYPAIYLGSIGDPRIAPGVLEKGILLTARFYFDEYVNLRPIKLLDGVWTPLKDKT
SKDIDFVVVRENTEDFYVGVGGRAKTGASKDLLEVKRTLYSAKFGLDIETDSEEIGYQIG
LISKEGTDRVIEYAFDLAENRKKHVSSVDKANVLSDIYGFWREEFNAISAKHPGVTTDFN
FVDAVTMWFVKNPEWFDVVVTPNMFGDIITDLGAMIQGGLGLAPGGNINPKGTSMFEPIH
GSAPKYKGQNKVNPIATIWAGAMLIEHLGEKEAADTIVNAIQKNILDGKVKTYDLGGKST
TSDVGDDITRIVRGE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtataagattccggtcctcccgggcgacgggataggcccagaaattatcgcc
gaaggcagaaaggtaatagatgccgctggcgaaagattcggttttgatgtagagtggatt
gaatacccgcagggagcagatcattatcttgaaacaggagaactgatttcggaagatact
ttaaaggagctatccggataccctgccatttaccttggttccatcggagacccaaggatt
gcccctggtgtccttgagaagggaatcttattaactgcacgcttttattttgacgagtat
gttaaccttcgcccgataaaacttcttgacggagtatggaccccgctcaaagacaaaacc
tcgaaagatatcgattttgtggttgtcagagaaaacactgaagacttctacgtaggggtc
ggcggccgagcaaaaacaggagcaagcaaagatcttcttgaagtaaaaagaacgctctac
tccgcaaaattcggtcttgatatcgagactgacagcgaagaaataggataccagataggc
ctgatctccaaagaaggcacagatagggttatcgagtacgcctttgaccttgctgagaac
cggaaaaaacacgtttcttccgttgacaaggcaaacgtgctttccgatatctacggcttc
tggagagaagagttcaatgcaatttctgcaaaacatcccggcgttactacagactttaat
ttcgttgatgccgtcacaatgtggtttgtgaaaaacccagaatggttcgatgtggttgta
accccgaacatgttcggagacattatcactgatctcggagccatgatccagggcggcctt
ggccttgctcccggcggaaacatcaacccgaaaggcacaagcatgttcgagcctattcac
ggttcagccccgaagtacaagggacagaacaaggtcaacccgattgccacaatctgggca
ggtgcaatgctcatagaacatctcggagaaaaggaagcagcagataccatagtcaatgca
atccagaaaaacatcctggacggcaaagtcaaaacctacgatttaggcggcaagagcaca
acctcagatgtcggagacgacattacaaggatagtaaggggagaataa
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