Methanosarcina barkeri MS: MSBRM_0456
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Entry
MSBRM_0456 CDS
T03838
Name
(GenBank) Lysyl-tRNA synthetase (class I)
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MSBRM_0456
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mby01007
]
MSBRM_0456
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mby03016
]
MSBRM_0456
Enzymes [BR:
mby01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MSBRM_0456
Amino acid related enzymes [BR:
mby01007
]
Aminoacyl-tRNA synthetase
Class I (A)
MSBRM_0456
Transfer RNA biogenesis [BR:
mby03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MSBRM_0456
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
AKB53454
UniProt:
A0A0E3QSK8
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Position
complement(559416..561029)
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AA seq
537 aa
AA seq
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MADTIHWADVIAEDVLKKNGKHLVATGITPSGNIHIGNMREVVTADAVYRALVDKGANAD
FIYIADNYDPLRKVYPFLPESYVEHVGKPISEIPCPCGNCANYAEHFLKPFLEALRRLGI
NPKVYRADEMYKTGKYTEAIKTALVKRDAIAKILEEVSGKTVASDWSPFNPRCDQCGRIT
TTKVTGFDLEAETVDYVCACEHSGTVPMAGGGKLTWRVDWPARWSVLGVTVEPFGKDHAS
RGGSYDTGKRIVKEIFGHEPPYPIVYEWIMLGKQGAMSSSTGVVVSISDMLKIVPPEVLR
YLIIRTKPEKHIQFDPGQPLLSLVDEYERLRTQFRENDPSLGTFQGRVYELSRATGVCQS
EIPFKQMVTIYQVARGDFDQVLKIVKRSGFSTEDKKCIKELADNVSKWLKLYAPPFAKFK
VKEKVPVQAATLSELQRAFLSAFAALIESRDEISGEEYHMLVYSAKDEGSELNRRIAEKL
NAHAPQVDPRELFKAIYISLLGQSSGPKAGWFLSSFEKEFLVERFEEASNYSPEINV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacaattcactgggcagacgtcatagccgaagacgtgttaaaaaagaatggc
aaacatcttgttgccacaggcattactccgtcggggaacatccatataggcaacatgaga
gaagtcgtgactgccgatgctgtttaccgggctctggttgataagggagcgaatgcggac
tttatctatattgctgacaattatgatcccctacgcaaggtttacccattccttcccgag
agttacgtagaacatgtggggaagcccatctccgaaattccctgcccctgtggaaactgc
gcaaactatgccgagcatttcttgaaacctttcctggaagccctcaggcgactgggcatt
aatcctaaggtttacagggcagacgagatgtataagacaggtaaatacaccgaagcaata
aaaactgcccttgttaaaagagatgccattgcaaaaatcctggaagaggtatcggggaaa
accgtagcttcggattggagcccttttaatcccagatgcgatcaatgcggaaggatcaca
acaacgaaggtaacgggttttgatctggaagctgaaaccgtggactatgtctgtgcatgc
gagcactccggaaccgtacccatggcggggggaggaaaacttacttggcgcgtagactgg
cctgcccgctggtcagttttaggagttactgtcgagcctttcggaaaagaccatgcttcg
agaggcggttcttatgataccggaaagagaatagtaaaagaaattttcgggcacgaacct
ccgtacccaattgtctatgagtggataatgcttggtaaacagggggcgatgtcttcttct
acaggggtcgttgtctcgatttcggacatgctgaaaatcgtaccacctgaagttcttcgc
tacctgatcattcgcacaaaacctgaaaaacacattcagtttgatcctggacagcctctc
ctctcccttgtggacgaatacgaacgactcaggacgcagttcagggaaaatgatccttca
cttggaacttttcagggaagagtgtatgaactttccagggcaaccggggtctgccagtct
gaaattcccttcaagcagatggtgactatatatcaggtagcaaggggagattttgaccag
gtactgaaaatcgtaaaacgttcaggtttttcaactgaagataaaaagtgtataaaagaa
ctggcagataacgtatcgaaatggctaaaactctatgctccaccctttgccaagtttaaa
gtgaaagaaaaagtacctgtacaggcagcaacactgtccgagcttcagagagcttttctt
tcagcctttgcagcccttattgaatccagagacgaaattagtggagaagaataccatatg
ttggtctattctgcaaaggacgaaggttccgaattgaacagacggattgcagaaaagctg
aatgctcatgctcctcaggttgatcccagggagcttttcaaggctatctatatttcatta
cttgggcagagttcaggccccaaagccggttggttcttatcttcgtttgagaaggaattt
ctggtagaaaggtttgaagaagcttcaaattacagtcctgaaataaacgtataa
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