Methanosarcina barkeri MS: MSBRM_0487
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Entry
MSBRM_0487 CDS
T03838
Name
(GenBank) Geranylfarnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00900
Terpenoid backbone biosynthesis
mby01100
Metabolic pathways
mby01110
Biosynthesis of secondary metabolites
Module
mby_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSBRM_0487
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mby01006
]
MSBRM_0487
Enzymes [BR:
mby01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSBRM_0487
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSBRM_0487
2.5.1.29 geranylgeranyl diphosphate synthase
MSBRM_0487
Prenyltransferases [BR:
mby01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSBRM_0487
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AKB53485
UniProt:
A0A0E3QSM8
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All DBs
Position
601576..602541
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AA seq
321 aa
AA seq
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MTLVDEIKKRSVHVDAAIDELLPVVRPEELYKASRYLVDSGGKRLRPAVLILAAEATGSE
LKSVLPAAVAVELVHNFTLIHDDIMDKDELRRGKPAVHMIWGEAGAILAGDTLYSKAFEI
LSKVENEPARILKCMDVLSKTCTEICEGQWLDMDFEKREKVSKAEYIEMVEKKTSVLYAA
AAKIGALLGGASDEIAEALSEYGRFIGIGFQMYDDVLDMVTPEEVLGKVRGSDLMEGKHT
LIVIDAFEKGVKLDIFGKGEATQEETDEAVRILTECGSIDYVKDLAISYINEGKAKLDAL
CDCPEKELLLQIADYMISRNY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgttagttgatgagatcaaaaaaagaagtgtccacgttgacgccgcaattgacgaa
ctgcttccggtagtccgtccagaggagctatataaagcctctcgctacctggtagattca
ggaggaaaacgcctccgccccgcagttcttattctggcagccgaagctacaggctcggaa
ctcaagtctgtcttacctgcagcggtggccgtggaacttgtacataatttcactctgatc
catgacgacataatggataaggatgagttacgcagagggaagcctgcagttcacatgata
tggggtgaagccggagcaatccttgcaggtgacactctttattctaaagctttcgagatc
ctgtctaaagttgaaaacgagcctgcaaggattttgaaatgtatggatgttctttcaaaa
acctgtacagaaatctgcgagggccagtggcttgatatggattttgaaaagagggaaaag
gttagtaaagctgaatatattgagatggtggaaaaaaagacctctgtcctttatgcagct
gcagccaagatcggggctcttcttggaggagcttctgatgagattgctgaagccttatct
gaatatgggcgctttatagggattgggttccagatgtatgacgatgttctggatatggtc
accccagaggaagtgctcggtaaggtaagaggtagcgaccttatggaagggaaacatact
cttattgtaatcgatgctttcgaaaaaggtgtgaaactggacattttcggaaaaggggaa
gcaactcaggaagaaactgacgaagccgtccggattttaaccgaatgcggatcaattgat
tatgtaaaggaccttgcaatttcatatatcaatgaaggcaaagcaaaactggacgctctg
tgtgactgtccggaaaaggagcttctccttcagattgccgattatatgatctcaaggaac
tactga
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