Methanosarcina barkeri MS: MSBRM_0886
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Entry
MSBRM_0886 CDS
T03838
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRM_0886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mby03021
]
MSBRM_0886
Enzymes [BR:
mby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRM_0886
Transcription machinery [BR:
mby03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRM_0886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
DUF1451
Motif
Other DBs
NCBI-ProteinID:
AKB53884
UniProt:
A0A0E3QSM7
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All DBs
Position
1161302..1163116
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AA seq
604 aa
AA seq
DB search
MTKAKVFINGELVGTHDNPTELVDELRKMRRQGFISRQVNVALNSNTREVIINSDMGRAR
RPLIVVENGVPKVTEEHIEKIKNKEINFDELVKEGCIEYLDAEEEENAYIALYEADLTPK
HTHMEIDPELILGISTGMVPYPEHNASPRNTMGAAMIKQCIGVATANQKLRPDTRAHVLH
YPQRAMTRTRTSEAIGFDDRPAGQNFVVAILSYEGYNIEDALIFNRGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEYRGARSAEAYANLDTDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSDFGIAMEQRRESSITMRSNETGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTESGMTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVDATAFSGEKEEDLREALKKHGFAHTGKEVFYDGATGKMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATYDKQRNVAFCSTCGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLKL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcaaaagtattcataaacggggagcttgtcgggacccacgataaccctacg
gagcttgtagacgagctcagaaagatgaggcggcagggtttcatatccaggcaggttaat
gtcgctcttaacagcaacacaagagaagtaattataaactccgatatgggcagagcaaga
aggccacttatagttgtggagaacggagttcctaaggtaactgaagagcacatagagaaa
attaaaaataaggaaatcaattttgatgaactggtaaaagaaggctgtatagagtatctc
gatgccgaagaagaggaaaatgcctacatcgcactttacgaggctgatcttactccaaag
cacactcacatggagattgatcctgaacttattcttggaatctctacgggaatggtgcct
tatcctgaacataatgcatctccgcgtaataccatgggtgcagccatgataaaacagtgt
attggggttgcaaccgcaaaccagaagctcagacctgatacccgggcccatgtccttcac
taccctcagagagcaatgaccagaactaggacctcggaagcaataggttttgatgataga
cctgcaggccaaaacttcgtggtcgcaatcctgtcctatgaagggtataacattgaagac
gccctgattttcaataggggttcaattgaaagaggtctcgggagaagtcactttctcaga
actttcgaaggagaagaacgaaggtatccgggtggacaggaagacaagtttgagattcct
gactccgaataccgcggagcgcgcagtgcagaagcctatgcaaacctggatacagacggg
cttgtaaatcccgaaaccccggttggtcccaatgatgtacttatcggaaaaaccagtcca
ccaaggttccttgaagaaccgtcagacttcgggattgcaatggagcagagaagagaaagc
tcgatcacaatgcggtcaaatgaaaccggaattgttgacacggtcatcctgaccgaatcc
attaacggaaccaggcttgctaaagtaaaggtaagagacgaaaggattcctgacataggg
gacaaattcgcttcaaggcacgggcaaaaaggagttattggcctgaaagtccctattgca
gatatgccgtttacggaatccggcatgactcctgacctgatgattaacccacatgcaatt
ccttcccgtatgactgtaggccacgtcctggaaatgattggtggaaaggtaggttccatg
gaaggcagacgagttgatgcaacagctttctcaggagagaaagaagaagacctcagagaa
gccctgaaaaagcacgggtttgctcacaccggaaaagaggttttctacgacggagctacc
ggcaagatgatccctgcagatgtctttgttggggttattctctaccagaaactgcaccac
atggtcacttcgaagatgcacgcacggtctcgtgggcctgtacaggtgcttacccgccag
ccaaccgaaggtcgagccagagaaggtggtctcagattcggagaaatggaacgtgatgtg
ctggtaggccacggggctgccatgtcgctaaaagagaggctgctcgacgagtcagataag
gttgttgaacttgtctgctctcactgtggaatgattgcaacgtatgacaagcagcgaaat
gtcgctttctgctcaacctgtggggctgacacggatatatatcctgtggagatgagctat
gcattcaagctgctgctggacgaaatcaaatctctgggagttgcgcccaggcttaaactt
gaagacgcggtatga
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