Methanosarcina barkeri MS: MSBRM_0887
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Entry
MSBRM_0887 CDS
T03838
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRM_0887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mby03021
]
MSBRM_0887
Enzymes [BR:
mby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRM_0887
Transcription machinery [BR:
mby03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRM_0887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AKB53885
UniProt:
A0A0E3QTL5
LinkDB
All DBs
Position
1163129..1165771
Genome browser
AA seq
880 aa
AA seq
DB search
MANVPPIPKRISSIKFGLLSPKEIRKMSSTPIITADTYDDDGFPIDMGLMDTRLGVIDPG
LRCKTCSGRAGECPGHFGHIELVAPVVHVGFNKVIRKLLRATCRKCSRLLLDPAQKQHYL
DQLVGIEEIGHMPDDLINEAYKEASKVKTCPYCNEEQLEIKFEKPTEYLENGEKLTPTEI
RDRFENIPDEDIRVIGMDPKNARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKLV
DIIRINQRFQENREAGAPQLIIEDLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQ
RLKGKEGRFRGSLSGKRVNFSARTVISPDPNLSINEVGVPMPIARILTMPLVVTQRNIEQ
LKIYVRNGEDIHPGANYVLRPDGRRIKVTSVNKDDLAEKLEFGWTVERQLKDGDIVLFNR
QPSLHKMSIMAHSVKVLPNKTFRLNPAVCPPYNADFDGDEMNMHALQTEESRAEAKILMQ
VQENILSPRFGGPIIGGIHDHISGLFLLTRFENHIPKNDAYDMLRKSDIRELPSPAGYDP
DGKPYWTGKQIFSQILPKNLNTQFAAQVCSHCDVCKKEECPNDAYVVIRDGELIKGTIDE
AAIGAFKGKIQDRIIKEIGPEAGARFIDNMTMLAVRAIMRTGLSFGIADEDIPKEARIQI
NEVLGKAEDAVQNLIKSYQNKELEPLPGRTLDETIEMSIMQKLGKARDETGNIADSHMGL
ENPAVIMARSGARGSILNLTQMAACVGQQAVRGERIRRGYAGRTLPHFQKGDLGSDAHGF
VKASYKSGLNPTEYFFHAIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDLTVRDT
RGVLVQFKYGEDGINPTKSDFSKPDTIHRIVNSVVNREVA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgtacctccaattccgaaaagaatttcttctattaaattcggcttactgtct
ccaaaagagatccgtaaaatgagttcaaccccgatcatcacagccgacacttacgacgat
gacggatttccaattgacatggggcttatggacacaagactcggagttattgaccctggg
cttcgctgcaaaacctgttcagggcgagcaggcgaatgccccggacacttcggacatatc
gaacttgtcgccccggtagtccatgttggcttcaataaagtaatccgaaaacttctcagg
gcaacctgcaggaaatgcagcaggctcctgcttgaccctgcacagaaacagcattatctg
gaccagcttgtcggcattgaggaaatcggacatatgcctgatgacctgattaacgaggct
tataaggaggccagtaaagtaaagacctgcccttactgcaatgaggaacagctggaaatt
aaattcgaaaaacccactgaatatctcgaaaacggggagaagctgacccctaccgagata
agggaccgttttgagaatatccctgatgaagatatccgggttatcgggatggacccgaag
aatgcaaggcctgaatggatgatccttacagtcctgcctgtacctcctgttacagttcgt
ccttcgattacccttgaatccgggcagcgcagtgaagatgacctgacccataaactcgta
gatattatcagaattaaccagcgcttccaggaaaacagggaagctggcgcccctcagctc
attattgaggacctctgggaacttcttcagtatcacgttacaaccttttttgacaattct
gtctcagggatacctcctgcaaggcacaggtcaggcaggcccttaaagactctttcccag
cgtttaaaaggtaaggaaggtcgtttcagaggaagcttatcgggtaaacgtgttaacttc
tcggcacgtacagtaatttctcctgacccaaacctgagcattaatgaggtaggggttcct
atgcccattgcacggatccttacaatgcccctggtggtaacacaaaggaatatagaacag
ctcaaaatttacgtgcgtaatggggaggatatacacccaggagcaaactatgtactccgc
cctgacggcaggcgtataaaagttacaagtgtaaacaaagacgaccttgccgaaaagctg
gagttcggatggacagttgaacgccagttaaaagatggagacattgtactctttaacagg
cagccgtctctgcacaagatgagtattatggctcattctgtgaaggtgcttccgaataag
actttcaggctgaatcctgctgtatgtcctccatataacgctgactttgatggggacgag
atgaacatgcacgcccttcagaccgaagagtccagggctgaggcaaagatcctgatgcag
gttcaggagaacattctttccccgcgttttggcggtcctattataggcgggattcatgac
cacatttcagggcttttcctgctgacacgttttgagaatcatatccctaaaaatgatgct
tacgatatgctccggaagagcgatatccgagagttgccttcccctgcaggttacgatcca
gatggaaagccctactggacaggaaaacagatcttcagccagatcctgcctaaaaacctt
aatacacagtttgcagcccaggtctgctcacactgtgacgtctgcaagaaagaggagtgt
ccgaacgatgcctatgtggtaatccgggacggagaactcattaaaggaacgatagacgag
gcagccattggagctttcaaaggaaagattcaggaccgcattatcaaggaaataggccct
gaagccggagctcgtttcatagataatatgaccatgcttgcagttagggctattatgcgg
acaggcttgagtttcggaatcgctgatgaagatattccgaaagaagccaggatccagatc
aatgaagtcctcggcaaagctgaagatgctgtgcagaacctcatcaagtcttaccagaat
aaggaacttgaacctcttcctggaaggacccttgatgagacaattgaaatgagcatcatg
cagaagctcggaaaggccagagacgagaccggtaacatagcagacagccatatgggactt
gaaaacccggcagttattatggcccgttcaggggcaagaggttccatcctgaaccttact
cagatggcggcctgtgttggtcagcaggcagtgcgtggtgaacgtatccgcagagggtat
gcaggcaggacattacctcatttccagaagggggatcttggttcggacgcccatggtttc
gtaaaggcaagctacaaaagcgggcttaacccgactgaatatttcttccatgcaattggt
ggtagggaaggtcttgtggacactgcagtcaggacatcacaatcagggtacctgcagaga
aggcttgtcaatgcgctccaggacttggaggtccagtatgaccttacagtcagggatacc
agaggtgtgctcgtgcagtttaagtatggagaagatgggattaaccccacaaaaagcgat
ttcagcaaacccgatacaatccacagaattgtcaattccgtagtaaaccgggaggtggcc
tga
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