Methanosarcina barkeri MS: MSBRM_1394
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Entry
MSBRM_1394 CDS
T03838
Name
(GenBank) DNA-directed RNA polymerase subunit F
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRM_1394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mby03021
]
MSBRM_1394
Enzymes [BR:
mby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRM_1394
Transcription machinery [BR:
mby03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRM_1394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
FliG_M
DUF3106
Motif
Other DBs
NCBI-ProteinID:
AKB54392
UniProt:
A0A0E3QUS6
LinkDB
All DBs
Position
complement(1840024..1840377)
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AA seq
117 aa
AA seq
DB search
MIVKEVLSEDLLTLAEVRELLTRIAEERREKGLEVGYGFRKALRHAEQFSKISGEKSREL
VNRLLELEKMKPSIAIRIADILPQSRDEIRSIYAKEKYTLSNEELDQILDYVLETIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgatagttaaggaagtcctcagtgaagatttattgaccttggccgaagtcagagaacta
cttaccaggatcgccgaagagcgcagagagaagggacttgaagtcggatatggatttaga
aaagctcttcgccatgctgaacaattctcaaagatcagtggagaaaaatcaagagaactg
gttaacaggctgttagaactcgaaaaaatgaagccttcaattgcgatcaggatcgcagat
attctgcctcaatccagggatgaaatccgatcaatctacgctaaagaaaaatataccctg
agcaatgaagaacttgatcaaattctcgattacgtgttggaaacgattgaataa
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