Methanosarcina barkeri MS: MSBRM_2096
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Entry
MSBRM_2096 CDS
T03838
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00730
Thiamine metabolism
mby01100
Metabolic pathways
mby01240
Biosynthesis of cofactors
mby04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSBRM_2096
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MSBRM_2096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mby03016
]
MSBRM_2096
Enzymes [BR:
mby01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MSBRM_2096
Transfer RNA biogenesis [BR:
mby03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSBRM_2096
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Gene cluster
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Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AKB55094
UniProt:
A0A0E3QWA9
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Position
complement(2729365..2730675)
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AA seq
436 aa
AA seq
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MTDNFNEIEAKPKADAYTSRENKHTPEDYIGNPDNPGSDPSSLKSEISSNVVIVRYGELA
LKSTGVRNWYEKILMKNIAAMLDSRDIPYSQIRREWGRIFIETKDFRAAEAAADVFGIVS
TSPALTTEPTLESAASVCATLAKDLVLEGESFAVRARRSGNHPFSSVDIGRTCGDAVWSA
LEKKGRHPKVDLSSPDKEVFVEMRQNLAYVYLETFKGVGGLPLGTQGSMVVLMSGGLDSP
VAAWLMMKRGVMIIPVYCNTSPYAENAARERAFECIRQLQKWAPGYQFKTYELPHGPNLR
TFIDICNRKNTCLLCKRMMYREAYEVMKKEGANGIITGSSLGQVASQTAANMYAEIYQLA
IPIYHPLIAFDKTEIIDIARKIGTYDISSRPAGSCTAVPERPEIGANYDLVVTEEQKMDI
KTMVFNAMKAAKVLKL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacagataatttcaatgagatcgaagcaaagcctaaggctgatgcctatacctcgaga
gaaaacaagcatacgccggaagattacatcggaaatccagataaccctggttccgacccc
tcttctttaaagtcggaaatttcatcgaatgtagtcatagttcggtatggcgaattagcc
cttaaaagtacaggagttcgaaactggtatgagaaaattcttatgaagaatattgcggca
atgctggattctcgagatattccatattcccagatacgtagggaatggggccgaatattc
atcgagactaaggatttccgtgcggctgaagcagctgctgacgtttttggaattgtctct
acttctcctgcattgacaactgagcctactcttgagagtgcagccagtgtatgtgctact
ctggctaaggacctggttttagaaggcgaatcttttgcggtcagggctagaagaagcgga
aaccatcctttttcttcggttgacataggcagaacctgtggagatgctgtctggagtgct
ctggaaaaaaaaggaaggcatcctaaggttgacctgagttctcctgataaggaagttttc
gtcgaaatgcggcaaaatctcgcttacgtctatctggaaacattcaaaggagtagggggt
cttcctctcggcacgcaaggaagtatggttgttttaatgtccggcgggcttgactctccg
gttgcagcctggcttatgatgaaacgcggagttatgattattccggtatactgcaatact
tcaccctatgccgagaatgccgcaagagaacgtgcttttgaatgtattcgccagctccag
aaatgggctccagggtatcagtttaagacatatgagcttcctcacggtcccaatcttcgg
acctttatcgacatctgcaaccgaaaaaatacctgtcttctctgcaaacgcatgatgtac
agggaagcctatgaggttatgaaaaaagaaggtgcaaacggaattattaccggttcttcc
ctgggtcaggtagcttcccagactgctgccaatatgtatgctgaaatctatcagcttgct
atccctatttaccatcctttgattgcctttgataagacagagataatagacattgcccgc
aaaatcggaacctatgatatttccagtcgacccgcaggcagttgcactgctgtgcctgag
cggcctgaaataggagcaaactacgaccttgtagtaactgaagaacaaaaaatggatatc
aagactatggttttcaatgctatgaaagcagcaaaagtccttaaactctga
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