Methanosarcina barkeri MS: MSBRM_2541
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Entry
MSBRM_2541 CDS
T03838
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mby03016
]
MSBRM_2541
Enzymes [BR:
mby01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
MSBRM_2541
Transfer RNA biogenesis [BR:
mby03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
MSBRM_2541
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AKB55539
UniProt:
A0A0E3QVT4
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All DBs
Position
complement(3355577..3356905)
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AA seq
442 aa
AA seq
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MKVYLESFGCSASQASAEIMKASVERLGHELLGPEAADQAEVYICNSCTVKYTTEQKILY
KIRSMGEKNIKVIVSGCMPEVQLEDILHANPEAHILGVNAISRLGELLSLIEQRKKKGLR
GGEHLEFRASEPVGFLNVPRERSNPNIHICQISQGCNFACSYCIVKYARGKLHSFPPDEI
VEDIRSAVAEGCREIWLTSQDDSQYGMDTGLRLPELLRMISEIPGDFKVRVGMMNPFSVL
PILDDLVEAFDSDKVFKLLHIPIQSASHSVLKRMNRLHKMDVVDTIIKKFRDRFEDLSLF
TDIIVGFCDETDDEFKETVEWVQKYRPEKVNISRYSPRPHTKAFSFRNLDSRILVQRSHE
LHKVCEQIKLGSKQAMIGWKGRVFVSKYTEIGDVLTRTDAYRPVVISGSNLKPGQYANVE
IVAAKPGYFLGKLAEGRQVSET
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctatcttgaaagttttggctgttcggcgagccaggcctcagccgagataatg
aaggcaagtgtcgaaagactaggacatgaactgctgggcccagaggctgccgatcaggca
gaggtctatatttgcaattcctgtacggtaaaatacactacagaacagaagatcttgtat
aaaatccgcagcatgggcgagaagaatattaaagttatcgtttccggctgtatgcctgaa
gtccagcttgaggacatcctgcatgcaaatcccgaagctcatatcctgggggtaaatgct
atttcccggcttggagagcttctttcattaatcgagcagagaaaaaagaaaggtctgcgc
ggaggagaacatctggaattccgagcttctgaacctgtgggctttctcaatgtcccgcgt
gagcgttctaaccctaatattcacatatgccagatctcgcagggctgcaattttgcctgt
tcctactgtattgtaaaatatgcaagaggcaagctgcactcttttccaccggatgagata
gttgaagatatccgttcagctgttgccgagggatgcagggaaatttggctcacatcccag
gacgacagccagtacggaatggatacgggtctcagacttccggaactcctgcgtatgatc
tcggaaattccaggcgacttcaaagtaagggtaggaatgatgaatcctttctctgtcctc
cccatactcgatgatctggtagaagcttttgattccgacaaggtcttcaaactactccac
atccctattcagtctgcttctcactcggtcctgaagagaatgaaccgtctgcacaaaatg
gacgtagtggacacaataattaagaaattccgtgaccgttttgaagatttatcccttttc
accgacataattgtaggcttctgcgatgaaaccgacgatgagttcaaagaaactgttgaa
tgggtacagaaataccgccctgaaaaggtcaatatctcaagatattctccccgcccgcat
acgaaagctttttccttccgaaacctcgactcaagaattttagttcagcgttctcatgaa
ttgcataaggtctgtgaacaaattaagctcgggtccaagcaggcaatgatcggctggaaa
ggccgggtttttgtctcaaaatatacggaaatcggtgatgttctcacccgcacggatgct
tatcgtccggttgttataagcggctcgaatctaaaacctggccagtacgcaaatgtggag
atcgttgctgcaaaacctggatatttccttggaaaattggctgaaggtcgacaagtttct
gagacatga
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