Methanosarcina barkeri MS: MSBRM_2668
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Entry
MSBRM_2668 CDS
T03838
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRM_2668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mby03021
]
MSBRM_2668
Enzymes [BR:
mby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRM_2668
Transcription machinery [BR:
mby03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRM_2668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
DUF826
RNase_II_C_S1
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
AKB55666
UniProt:
A0A0E3LP02
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All DBs
Position
3507428..3508012
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AA seq
194 aa
AA seq
DB search
MYKMMKLVDTVRIPPTLLGEEVSQTVKNALREKLEGQVDKKLGALVAICKIVEIGEGHIL
VGDGAVYYDVTFEAIMFVPELQEIIEGEVVETVGFGVFVGMGPMDGLLHVSQITDDFISY
DAKNARLVTKNGGKSIAEGDHVRARVVAVSINEREPKESKIGLTMRQTALGKLQWIEEAR
KKKQSHEAVPEGAA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaatgatgaagctcgttgatacggtccgtatccctcctacccttttaggggaa
gaggtgtcgcaaactgttaaaaacgcgttaagagaaaaactcgagggtcaggttgacaaa
aaacttggtgccctcgtcgcaatttgcaagatagtcgagataggagaagggcatatcctc
gtaggagacggagcagtatattacgatgttacattcgaagcaataatgttcgtgcctgag
ctccaggagattattgagggtgaagttgttgaaaccgttggtttcggagttttcgtaggg
atgggaccaatggacggcttgcttcacgtcagccagattacggacgattttatttcatac
gacgccaagaacgcaaggcttgtgacaaagaacggaggaaaatccattgctgaaggtgac
catgtaagggccagggttgtcgctgtaagcattaacgagagagaacccaaagaaagtaaa
ataggccttactatgcgtcagactgctcttggaaagctgcagtggattgaggaagcccgt
aaaaagaaacagtctcatgaagctgttcctgaaggagctgcctga
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