KEGG   Mytilus californianus (California mussel): 127698203
Entry
127698203         CDS       T08804                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
mcaf  Mytilus californianus (California mussel)
Pathway
mcaf03020  RNA polymerase
mcaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127698203
  09124 Replication and repair
   03420 Nucleotide excision repair
    127698203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcaf03021]
    127698203
   03400 DNA repair and recombination proteins [BR:mcaf03400]
    127698203
Transcription machinery [BR:mcaf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127698203
DNA repair and recombination proteins [BR:mcaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127698203
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta CpXC DZR
Other DBs
NCBI-GeneID: 127698203
NCBI-ProteinID: XP_052057519
LinkDB
Position
Unknown
AA seq 127 aa
MDIYEQHDDGPGFVGIKFCKECNNMLYPKEDKENKILLYACRNCDYQQVADNPCIYVNKI
THEVDELTQIIGDVIADPTLPRTEDHPCPKCQHKESVFFQSHSNKAEEGMRLYYVCTNQQ
CVHRWTE
NT seq 384 nt   +upstreamnt  +downstreamnt
atggacatctacgaacaacacgatgatggtcctggatttgtaggcattaaattttgcaaa
gaatgcaacaacatgttgtatcctaaagaagacaaagagaacaaaatacttttgtatgct
tgtagaaattgtgattaccaacaggtagcagacaatccatgtatttatgtcaacaaaatt
acacatgaagtggatgagttgacacaaattattggtgatgtgatagcagatcccacactt
cctagaacagaggaccatccatgtcctaaatgtcaacacaaagaatctgtatttttccag
tcccacagtaataaggcagaggaaggaatgaggttatattatgtgtgtacgaatcaacag
tgtgttcatcggtggacagaatga

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