KEGG   Mytilus californianus (California mussel): 127706841
Entry
127706841         CDS       T08804                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
mcaf  Mytilus californianus (California mussel)
Pathway
mcaf03020  RNA polymerase
mcaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127706841
  09124 Replication and repair
   03420 Nucleotide excision repair
    127706841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcaf03021]
    127706841
   03400 DNA repair and recombination proteins [BR:mcaf03400]
    127706841
Transcription machinery [BR:mcaf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127706841
DNA repair and recombination proteins [BR:mcaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127706841
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 127706841
NCBI-ProteinID: XP_052067518
LinkDB
Position
Unknown
AA seq 145 aa
MATPSGHTQPLPNEQEEEDASELLFPKEFENAETLLISEVQMLLDHRKQQNESAEEEQEL
SEVFMKTLNYTSRFSKFKNRETITAVRSLLMQKKLHKFELAALANLCPDNAEEAKSLIPS
LEGRFEDEELQHILEDIQTKRSFQY
NT seq 438 nt   +upstreamnt  +downstreamnt
atggcgactcccagtggacacacacaacctcttcctaacgaacaagaagaagaggacgcg
tctgaattacttttccctaaagagtttgagaatgcagaaactttactgatatcagaagta
cagatgttactggaccataggaaacaacagaacgaaagcgcagaagaagagcaggaatta
tcagaagtttttatgaagacactgaattataccagccgattctcaaagtttaaaaataga
gagactatcactgcagtaagaagtctgttaatgcagaagaagttacacaagtttgagttg
gcagctcttgcaaacttgtgtcctgataatgcagaagaagctaagtctctcataccaagt
ttggagggtagatttgaagatgaagaactacaacacatactagaagatattcagactaaa
aggagctttcagtattaa

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