Mytilus californianus (California mussel): 127738434
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Entry
127738434 CDS
T08804
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127738434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127738434
Enzymes [BR:
mcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127738434
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127738434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Tra_M
CX
Motif
Other DBs
NCBI-GeneID:
127738434
NCBI-ProteinID:
XP_052105638
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
METEVVTQTLCSVSFEFYNNTEIKKLSVKEINNAQTFDTLLNPNPGGLYDSALGPVDKTD
VCGTCGLNFVHCPGHMGHIELPVPVFNPVFFKIMYKTLCGSCFECTRMAVKTINSAVFVG
QMELLDHGLLTSAMEVEHYGNHLQIEMQDSDQIPDMVNQWVQQQMKDRTKEKDSSKNITA
ARTEFVTNFLREYLAKQKKCPHCQEKKKSLHHEHFNKILLQHKLSVREKSIKAKQKNNKN
NEKTDDGDPGDEEGDQNPSKSTGTQRYLTPTELRDHMRGLWTNDKTLLKHLFKALSLNVA
DQSTDIFFLDVIPVPPSRFRPVSRMGDRQFENPQTANLSRLLSDSVLIRLIIDLMDKQNK
EKSETVEIPTSLSVVPGKTLVDKLQNAWILLQTHVNSCYDGDLDRLSTEKRNGIKQLLEK
KEGLFRKNMMGKRVDFACRSVISPDPSLNTNEIGIPEVFAKKLTFPQPVTPWNVHELRQA
VINGPLKHPGASFVVNENGGKVMLSATDKTQREAIAKQLLTPSNNGSMMGCKKVLRHLKN
GDILLLNRQPTLHKSSIQAHKARVLPGEKTLRMHYANCKAYNADFDGDEMNAHFPQNELC
RAEAYTIVATDYQYLVPKDGTPLAGLIQDHMIAGASLTMRGRFFNRHDYCQLVYTALGDK
HGNIRMLKPALIRPYTLWSGKQVLSTVLINVIPSGKPALHLNGKAKINERSWAEGRRPKY
GIHEDVSEDMGESHVIFRDGQLLCGVLDKGHYGPTPYGLVHCCNELYGGVVAGQILTCFG
RLFINFLQTTRGFSLGVQDILVTKKADDRRTEAIEMSNTVGPSAAAEALSFDTLPEKEVM
LKALKSAHFNKDDRQLREQDLSMKDKTDRIQNDISRACMGGLEQVFPRNNLQLMVQSGAK
GSTVNCMQISCLLGQIELEGRRPPLMLSGKTLPSFCQYDVSPMAGGFVTGRFLTGIRPQE
YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEGVMVNYDMTVRDSDGSIVQFNYGEDG
LDICKTGFLKQKQFPLLLENKHILENKQNGNREIEFDKKVKKWQKKIRKWHRNHGNHRDS
GFLEFCRENSDTQSDDVTIESNGRTKSALQLSEMWRNLDSDEKERYCNNKGPCPDPVTSK
YLPFEKNGVFTEKMGSLIEQFAHQELGQLPAGKDVKPEAFTSLLYSKVQQALAQPGESVG
LLCSQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAAIKTPSMDIPVYNTE
EARHVAKYLQMKFNRVLLNEVLQDVKVCEYLKVKGVSQSHRSRVFRVKFNFLPAANYKNK
LCVRPKNILHYMETVYIKHLIALIKKKIKELKDGRLMSTGTIAQRPQRVYHDATQAQQED
LSDVEEDDGDAVAVKERGRMEEEKEYEDGEEGEDEENKTQAEEIDDPEGEAEVVEMEGTP
DDLEEEEMEDGITSTMKVEKKKTEVRINSVLQLSAQVKDYKFDTKKEEWCEITLQFNILD
SKIDLPSLIDLDIRKAVVHEVPGVTRCFLSTQKNGEVHLKTEGINILEVYKYSDFLDISR
LYSNDIHAMAERYGIEAAGRVIIKEVQNVFGAYGIDVDYRHLSLLADYMTFEGSYKPFNR
VAMETCSSPLQQMSFETTMHFLVNASIHGSHDSLKSPSAQLVTGKLVTCGSGSFELMNRI
TV
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagaagttgtgacacagactctctgttcagtcagctttgagttttataacaac
actgaaataaagaagttaagtgtgaaggaaataaataatgcacagacatttgatacactt
cttaatcccaatcctggaggattatatgattcagcattagggccagtagacaaaactgat
gtgtgtggaacatgtggtctaaactttgtccattgtccaggacatatgggacatattgaa
cttcctgttcctgttttcaatcctgtatttttcaagataatgtataagactttatgtgga
tcctgctttgagtgtacacggatggccgttaagacaataaatagtgcagtattcgtaggt
caaatggaattacttgatcatggacttttgacatcagccatggaagtagaacattatgga
aaccaccttcaaattgaaatgcaggactctgatcagattcctgacatggtaaaccaatgg
gtacaacaacagatgaaagacaggacaaaagaaaaagattcatcaaaaaatataactgca
gccaggacagaatttgtgactaattttttgagagagtatttggctaagcaaaaaaaatgt
ccacattgccaagagaaaaagaaaagtttacatcatgagcatttcaacaagatacttctg
cagcacaaattatctgttagagaaaagtctattaaagccaaacagaaaaataacaaaaat
aatgaaaaaactgatgatggagatccaggtgatgaagaaggggatcaaaatccatcgaaa
tctactggtacccagagatacttaacaccaacagaattaagagaccacatgcgtggattg
tggacaaatgataagactttactgaaacatttgtttaaagctctgtcattaaatgtggct
gatcagtcaacagatattttttttcttgatgtgattcctgtaccgccatcaagattcagg
ccagtatccagaatgggagacagacagtttgagaaccctcagacagctaacctgtccaga
cttctgagtgattcggtactaatacgtctgattatagacttgatggataaacaaaacaag
gaaaaatcagagactgttgaaatacctacaagtttatcagtagtaccagggaagacacta
gtagataagttacagaatgcttggattttattacaaacacatgtcaacagctgttatgat
ggtgaccttgatagattgtctacagagaaacgaaatggaattaaacagctcctagagaag
aaagaaggattgttccgtaagaacatgatgggaaagcgtgttgatttcgcttgcagatca
gttatttcccctgatccttctttaaatactaatgagattggtattccagaagtgtttgct
aaaaagttgacctttccacagccagtgacaccatggaatgtacatgaattaagacaagct
gttataaacggaccattaaaacacccaggggcatcctttgttgtaaatgaaaatggtgga
aaggtcatgttaagtgccacagataaaactcaaagagaggctatagctaaacagctactt
acaccaagtaataatggatctatgatgggatgtaaaaaggtgcttagacatttaaagaat
ggtgatattctattgctgaacagacaaccaacgcttcataaatctagtatccaggcacac
aaggctagagtattaccaggagagaaaactttaagaatgcactatgctaactgtaaagcc
tataatgctgattttgatggagatgaaatgaatgctcattttccacagaatgaattatgt
agagctgaagcttatactatagtggctacagattaccagtatttagtgccaaaggatggt
acaccattagcaggccttatccaagatcacatgattgctggagcttcattaacaatgagg
ggaagatttttcaacagacatgattattgtcagctggtgtacacagcattaggtgataaa
catggaaatatcaggatgttaaaaccagctttgataagaccttacacactgtggtctggt
aaacaggtcttgtcaacagttctgataaatgtcattccaagtggtaaacctgcattacat
ttgaatggtaaagccaaaattaatgaaaggagttgggcagaaggtagaagaccaaagtat
ggaattcatgaggatgtatcagaggacatgggagaaagtcatgtgatctttagggatggg
cagttgttatgtggtgtccttgacaaaggtcattatggtcctacaccttatggactggta
cattgttgtaatgagttatatggaggtgtggtagcaggtcagatattgacatgttttggt
agattatttatcaacttcctccaaacgacaagaggattttcactgggagttcaagatatt
ctagtcactaagaaggctgatgaccgaaggacagaagctatagaaatgtctaatactgtt
ggtccatctgctgcagcagaggcacttagtttcgatactttaccagaaaaggaagtcatg
ttaaaggccctgaaatctgcacattttaacaaagatgacagacaactgagagaacaagac
cttagcatgaaagataaaacagatcgaatacaaaatgacatatcaagggcctgtatgggt
ggattagaacaagtctttcccaggaacaacttacagttaatggtacagtcaggagctaaa
ggttcaactgtcaattgtatgcagatatcatgtttgcttggacagattgaattagaagga
agacgaccaccactaatgctaagtggaaaaacactgccatctttttgccagtatgatgta
tctcctatggctggaggttttgttactgggaggtttctgactggaataagacctcaagaa
tattattttcattgtatggcaggtagagagggtttggtagatacagctgtaaagacaagt
cgtagtggctatttacagagatgtcttatcaaacatctagagggagtgatggttaactat
gatatgacagtaagagacagtgatggcagtattgtacagttcaattatggtgaagatggt
cttgacatttgcaaaactggtttcctaaaacagaagcagtttcctttattgttagaaaac
aaacacatcttagaaaataagcaaaatggaaacagggaaattgaatttgacaagaaagta
aaaaaatggcagaaaaagataaggaaatggcacagaaatcatgggaatcatagggattct
ggtttcctagaattctgtagagaaaacagtgatacccaaagtgatgacgttacaatagaa
agtaatggacgtacaaagagtgctcttcagttgtctgagatgtggagaaatctagactcc
gatgaaaaggaaagatattgtaataataagggaccttgtcccgatcctgttacatctaag
tatctaccgtttgagaaaaatggagtatttacagaaaagatgggcagtttgattgaacaa
tttgctcaccaagaattgggacagctgccagcaggaaaagatgtaaaaccagaagcgttc
acaagtttgttatacagcaaggtacagcaagctctggcacaaccaggtgaatctgtagga
ttgttgtgttcacagtcaataggtgaaccttcaactcagatgacattgaatacttttcat
tttgctggtcgtggtgaaatgaacgtgaccttaggtattcctagattaagagaaattctt
atggtagccagtgcagctattaaaactccctctatggatatacctgtatataacactgaa
gaagctagacatgttgctaaatatttacagatgaagtttaatcgagtattgttaaatgag
gtactacaagacgtaaaagtgtgtgaatatttgaaagttaaaggagttagtcaaagtcac
agaagtagagtatttagagtaaagtttaacttcttgccagcagcgaactataagaataaa
ttgtgtgtcagaccaaaaaatattttacattacatggagactgtgtacatcaaacatctc
attgcactgatcaagaaaaagatcaaggaattgaaagatggcaggctgatgagtacaggg
acaatagctcagagaccacagagggtttatcatgatgctactcaggctcagcaggaagat
ttatctgatgtggaggaggatgatggggatgctgttgctgtgaaggagagaggaaggatg
gaagaggaaaaggaatatgaggatggagaggagggagaagatgaagaaaataaaacacaa
gcagaggagattgatgacccagagggagaagcagaagtagtagaaatggaaggaacaccg
gatgatcttgaagaagaggaaatggaagatggaattacaagtacaatgaaggttgagaaa
aagaaaactgaagttagaattaatagtgtgttacagttaagtgcacaagtaaaagattac
aaatttgatactaaaaaagaggaatggtgtgaaataactttacagtttaatatattggac
agtaagatagatttaccatcattgattgaccttgacattagaaaagcagtggtccatgaa
gtaccaggtgtcacaaggtgtttcctgtccactcagaaaaatggagaagttcatctcaaa
acagaaggaataaatatcttggaggtgtacaaatattcagacttcctggatatatcccgt
ttatacagtaatgatatccatgctatggcagagagatatggtatagaagcggctggcaga
gttatcattaaggaagtacagaatgtatttggtgcttatggtattgatgtagactaccgc
catctttctttgttagcagactacatgacatttgaaggatcttacaaaccattcaataga
gttgctatggaaacatgttcttcacctttacaacaaatgagttttgaaacaacaatgcac
tttctagtgaatgctagtatccatggaagtcatgattctttaaaatcgccgtctgctcag
ttagtgacaggaaaacttgtaacatgtggttctggatcatttgaattgatgaacagaata
actgtttga
DBGET
integrated database retrieval system
