Mus caroli (Ryukyu mouse): 110284885
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Entry
110284885 CDS
T05910
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110284885 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110284885 (Polr1b)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110284885 (Polr1b)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110284885 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
110284885
NCBI-ProteinID:
XP_021006497
Ensembl:
MGP_CAROLIEiJ_G0024281
UniProt:
A0A6P5NWQ7
LinkDB
All DBs
Position
2:121933353..121956942
Genome browser
AA seq
996 aa
AA seq
DB search
MVKSKLCNLYNLPPRDLIEHHEEAEEMGGYFIINGIEKVIRMLIVPRRNFPIAMVRPKWK
SRGLGYTQFGVSMHCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFALKALVSF
SDYQIFQELIKGKEEDSFFRNSVSQMLRIVMEEGCHSQKQVLNYLGECFRVKLSLPDWYP
NVEAAQFLLNQCICIHLKSNTDKFYLLCLMTRKLFALARGECMEDNPDSLVNQEVLTPGQ
LFLMFLKEKMENWLVSIKIVLDKRAQKANVSINNENLMKIFSMGTELTRPFEYLLATGNL
RSKTGLGFLQDSGLCVVADKLNFLRYLSHFRCVHRGAAFAKMRTTTVRRLLPESWGFLCP
VHTPDGAPCGLLNHLTAVCEVVTKFVYTASIPALLCGLGVTPVDAAPCRPYSDCYPVLLD
GVVVGWVDKELAPEVADTLRRFKVLREKRIPPWMEVALIPMTGKPSLYPGLFLFTTPCRL
VRPVQNLELGREELIGTMEQLFMNVAIFEDEVFGGISTHQELFPHSLLSVIANFIPFSDH
NQSPRNMYQCQMGKQTMGFPLLTYQNRSDNKLYRLQTPQSPLVRPCMYDFYDMDNYPIGT
NAVVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKFKQGEDNLVFGVKPG
DPRVMQKLDDDGLPFIGAKLEYGDPYYSYLNLNTGEGFVVYYKSKENCVVDNIKVCSNDT
GSGKFKCICITVRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMMPDILFNPHG
FPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALEYFGEMLKAAGYNFYGTERL
YSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPLGGRNVQGGIRFGE
MERDALLAHGTSFLLHDRLFNCSDRSVAHVCVECGSLLSPLLEKPPPSWSAMRNRKYNCT
VCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtccaagctttgcaacttatacaaccttcctcctcgagacctcattgagcac
catgaggaggcagaggaaatgggcggttattttataatcaatggcatagaaaaagtcatc
cgcatgttgattgtgccccggagaaatttccccatcgccatggtaaggccgaaatggaaa
agcagaggactcggctacactcagtttggggtctccatgcactgtgtgagagaagagcac
tctgccgtgaacatgaacctgcactatgtggagaacggcacagttatgttaaactttatt
taccgcaaagagctctttttccttcctttgggatttgctcttaaggcactcgtgagcttt
tctgattatcagattttccaggagcttatcaagggcaaagaggaggactctttcttcagg
aattctgtttctcagatgctgcggattgtcatggaagagggttgtcactcacagaagcag
gttcttaactatctgggagaatgcttccgagtgaagctcagccttcctgattggtaccct
aacgtggaagctgcccagttcctgcttaaccagtgcatctgcatccacctgaagtccaac
actgacaagttctacctgctctgcctcatgacccggaagctgtttgctttagccagaggg
gagtgcatggaggacaaccctgatagcttagtgaaccaagaagtccttacccctgggcag
ctcttcctgatgtttctgaaggaaaaaatggaaaactggctagtgtctattaaaatagtt
ttagataagagggctcagaaggccaatgtttccataaacaacgagaatttgatgaagatt
tttagtatgggaacagagctaacaagaccatttgaatatcttcttgctactgggaatctg
cgttctaaaacaggtcttggcttcctgcaagattctggcctgtgtgttgtggctgacaag
ctgaacttccttcgctacctctcccatttccgctgtgtgcacagaggggctgcctttgcc
aagatgaggacgaccaccgtgcgcaggctgctgccagaatcctggggcttcctctgtcct
gtgcacactccagacggggcgccgtgtgggctgttgaaccacctgactgccgtgtgtgag
gttgttaccaagtttgtgtacacggcgtctattccagccttgctctgtggcttaggagtc
actcctgttgatgcagcgccatgtcgaccgtacagtgactgctaccctgtcctgctggat
ggtgtcgtggtgggctgggtggataaggagcttgctcctgaagttgccgacactctccgt
cgattcaaggtgttgagagaaaaaagaattcctccctggatggaggtggccctgattccc
atgacaggaaaaccaagtctgtacccagggctgttcctctttaccactccctgcaggctg
gtgaggcccgtgcagaacttggaactgggcagagaagagctcattggaaccatggaacag
ctcttcatgaacgtcgccatctttgaggacgaggtgtttggtggcatctccacacaccag
gagctcttccctcacagcctgctgagtgtgatcgccaacttcatccccttctcagatcac
aaccagagtcctcggaacatgtaccagtgccagatgggtaagcagaccatgggctttccg
ctgctcacttaccaaaaccgatcagataataaactctatcgactccaaacccctcagagt
cctctagtaagaccgtgcatgtatgatttctatgacatggacaactatccgatcgggaca
aacgccgttgtagctgtgatatcctatactggctatgatatggaggatgccatgattgtg
aacaaggcttcctgggaacgaggcttcgctcatggaagcgtctacaagtctgagttcata
gacctctcagagaagtttaagcagggagaggataacctggtgttcggggtcaaacctggt
gaccctcgggtgatgcagaagctggacgatgatgggttgccattcataggcgcaaagctg
gagtatggcgacccttactacagctacctcaaccttaacactggggaaggcttcgtggtt
tactacaagagtaaagaaaactgtgttgtggacaacatcaaagtgtgtagtaatgacacg
ggcagtgggaagttcaagtgtatctgcatcacagtccgcgtcccccggaacccaaccatt
ggagataagtttgccagccgtcatggtcagaagggtattttgagcagattgtggccagcc
gaggacatgcctttcactgagagtggcatgatgccggacattctgtttaatcctcacggg
tttccctcccgtatgaccataggtatgttaatcgagagcatggctgggaagtctgcagct
ttgcacggtctctgccatgatgctacgcccttcatcttctccgaggagaactctgcctta
gagtactttggtgagatgttaaaggctgctggctacaacttctatggcaccgagagactg
tatagtggcatcagcgggatggagctggaggctgacatcttcattggtgtggtttattac
cagcgcttacgacacatggtgtcagacaaatttcaagtcagaacaactggagccagggac
aaagtcaccaaccagcccctcgggggacgaaacgttcagggtggaatccgctttggggag
atggagcgggatgctctgttggcacacggtacatctttccttcttcatgaccggcttttc
aactgctctgaccgttctgtcgcccacgtgtgtgtggagtgtggcagtttgctttctccg
ctacttgagaagcctcctccgtcttggtctgcgatgcgcaacagaaagtacaactgcact
gtctgtggccgcagtgacaccatcgacaccgtctctgtgccgtatgtcttccggtacttt
gtagctgagctggcagccatgaacatcaaagtgaaactggacgtcatctga
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