Mus caroli (Ryukyu mouse): 110298244
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Entry
110298244 CDS
T05910
Symbol
Setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00310
Lysine degradation
mcal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110298244 (Setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110298244 (Setd1a)
Enzymes [BR:
mcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
110298244 (Setd1a)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110298244 (Setd1a)
HMT complexes
COMPASS/SET1 complex
110298244 (Setd1a)
COMPASS/SET1 complex (yeast)
110298244 (Setd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Topoisom_I_N
Motif
Other DBs
NCBI-GeneID:
110298244
NCBI-ProteinID:
XP_021023029
Ensembl:
MGP_CAROLIEiJ_G0030519
UniProt:
A0A6P7R6G9
LinkDB
All DBs
Position
7:129816210..129841515
Genome browser
AA seq
1725 aa
AA seq
DB search
MDQEGGGDGQKAPSFQWRNYKLIVDPALDPALRRPSQKVYRYDGVHFSVSDSKYTPVEDL
QDPRCHVRSKNRDFSLPVPKFKLDEFYIGQIPLKEVTFARLNDNVRETFLKDMCRKYGEV
EEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSVMGNIIHAQLDIKGQQRMKYY
ELIVNGSYTPQTVPTGGKALSEKFQGSGAATETTEARRRSSSDTAAYPAGTTVGGTPGNG
TPCSQDTNFSSSRQDTPSSFGQFTPQSSQGTPYTSRGSTPYSQDSAYSSSTTSTSFKPRR
SENSYQDSFSRRHFSTSSAPATTATATSATAAATAASSSSSSSSSSSSSSSSSSSSASQF
RGSDSSYPAYYESWNRYQRHTSYPPRRATREDPSGASFAENTAERFPPSYTSYLAPEPNR
STDQDYRPPASEAPPPEPPEPGGGGSGGSGSGGSGGGGGGGGGGGGGAPSPEREEARTPP
RPASPARSGSPAPETTNESVPFAQHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSSAG
PGARDAGGEVPSGAGHGPCTPPPAPANFEDVAPTGSGEPGAARESPKANGQNQASPCSSG
EDMEISDDDRGGSPPPAPTPPQQPPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPHPD
GPPPPEYPPPPPPPPPHIYDFVNSLELMDRLGAQWGGMPMSFQMQTQMLTRLHQLRQGKG
LTAASAGPPGGAFGEAFLPFPPPQEAAYGLPYALYTQGQEGRGAYSREAYHLPLPMAAEP
LPSSSVSGEEARMPHREEAEIAESKVLPSAGTVGRVLATLVQEMKSIMQRDLNRKMVENV
AFGAFDQWWESKEEKAKPFQNAAKQQAKEEDKEKMKLKEPGMLSLVDWAKSGGITGIEAF
AFGSGLRGALRLPSFKVKRKEPSEISEASEEKRPRPSTPAEEDEDDPEREKEAGEPGRPG
TKPPKRDEERGKTQGKHRKSFTLDSEGEEASQESSSEKDEDDDDEDEEDEEQEEAVDATK
KEAEASDGEDEDSDSSSQCSLYADSDGENGSTSDSESGSSSSSSSSSSSSSSSSSSESSS
EEEEQSAVIPSASPLREVPEPLPAPDEKPETDGLVDSPVMPLSEKETSPTQPAGPAEEPP
PSVPQPPAEPPAGPPDAAPRLDERPSSPIPLLPPPKKRRKTVSFSAAEEVPVPEPSTAAP
LQAKSSGPVSRKVPRVVERTIRNLPLDHASLVKSWPEEVARGGRNRAGGRVRSTEEEEAT
ESGTEVDLAVLADLALTPARRGLATLPTGDDSEATETSDEAERPSPLLSHILLEHNYALA
IKPPPTTPAPRPLEPAPALAALFSSPADEVLEAPEVVVAEAEEPKQQLQQQQHPEQEGEE
EEEDEEEESESSESSSSSSSSDEEGAIRRRSLRSHTRRRRPPLPPPPPPPPSFEPRSEFE
QMTILYDIWNSGLDLEDMSYLRLTYERLLQQTSGADWLNDTHWVQHTITNLSTPKRKRRP
QDGPREHQTGSARSEGYYPISKKEKDKYLDVCPVSARQLEGGDTQGTNRVLSERRSEQRR
LLSAIGTSAIMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNI
RQMVADMREKRYVQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIES
QKKIVIYSKQPIGVDEEITYDYKFPLEDNKIPCLCGTESCRGSLN
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggaaggtgggggagacgggcagaaagccccgagcttccagtggcggaactac
aagctcatagtggatcctgctttggaccctgctttgcgcaggccttctcagaaggtgtac
cgctatgacggagtccacttcagtgtcagtgactcaaagtatacccccgtggaagacctc
caggacccccgctgtcatgtcaggtccaaaaacagagacttttccctcccggttcctaag
tttaagctggatgagttctatattggacagattccactgaaggaagtaacttttgcgagg
ctcaatgacaatgtgagggaaaccttcctgaaggatatgtgccggaaatatggtgaggtg
gaagaagtggagatccttcttcatccccgcactcgaaagcacctgggcctagcccgtgtg
ctcttcaccagcacgcggggggccaaggaaactgtcaaaaacctccacctcacctctgtc
atgggcaatatcattcatgcccagcttgatatcaaaggccagcaacgaatgaagtactat
gaattgattgtcaatggctcttacactcctcagactgtgcccactgggggcaaggccttg
agtgagaagttccagggttctggtgcagccactgagacgactgaagcccgccgacggtct
tcctctgacacagctgcctatccagcaggcactactgtggggggcacccctggcaatggc
actccctgctcccaagatacaaatttctccagcagtcgacaagatactccatcttccttt
ggccagttcacccctcagtcctcccaaggaaccccctacacatctcggggtagcaccccc
tactctcaggactcagcctactccagcagcaccacttcaacctccttcaaaccccggcgg
tcagagaacagctatcaagattctttttctcgccgccatttctctacatcttcagcccct
gcaaccaccgctactgccacctcagcaactgctgcagctactgcagcctcctcctcctca
tcttcctcctcctcgtcatcctcctcctcgtcgtcatcttcttcctcagcctctcagttc
cgtggttctgactctagctacccagcatattatgaaagctggaatcgttaccagcgccat
acttcctatccacctcgccgggcaactagagaggacccttctggggcttcatttgccgaa
aatacggctgagcgcttcccaccttcctatacctcctatttggcccctgagcccaaccga
tccactgaccaagactaccggcctcctgcctcagaggccccacctccagaacctccagaa
cctggtggtggtggtagtggtggtagtggtagtggtggtagtggtggtggtggtggcggc
ggcggtggtggtggtggtggggcacccagccctgagagagaagaagcccggactccccca
cgcccagcttcccctgcacgctctggctccccagccccagagaccaccaacgagagtgtg
ccctttgctcagcacagcagtttggattcccgtattgaaatgctgctgaaggaacaacgc
tccaagttttctttcttggcttctgacacagaggaagaggaagagaacagcagtgcaggc
cctggggctagagatgcagggggtgaggtgccttctggggcaggtcatgggccctgtaca
ccccctcctgcaccagctaattttgaagatgtagcacctacagggagtggagagccaggg
gctgcccgggagtcaccaaaggccaatggacagaaccaggcttctccatgttcttccgga
gaagatatggagatctctgatgatgacaggggtggctcaccacctccagccccaacaccc
ccccagcagccgccaccgccaccacctccccctcctccccctcctcctccctaccttgct
tcccttccccttggctatcctccccaccaacctgcctacctcctcccaccccacccagat
ggaccacccccccctgagtaccctccgccacctcctccaccaccaccccacatctatgac
tttgtgaactccctggaacttatggatcgacttggggcacagtggggagggatgcccatg
tccttccagatgcagacccagatgttaacacggctccaccagttacggcagggcaaggga
ttgactgcagcctcagctggtcctcctggcggggcttttggcgaggcctttctccctttt
ccacctccacaagaggcagcctatggcttgccctatgctctgtacacacaagggcaagaa
ggacgtggggcgtactcccgggaggcctaccacctgcccttgcctatggcagccgagccc
ctgccctcttcctcagtctcgggagaggaggcgcggatgcctcatagggaggaagcagag
atagcagaaagcaaggtcctaccatcagcaggcacagtgggtcgtgtgctggctaccctt
gtccaagagatgaagagcattatgcagcgagacctcaatcgaaagatggtcgagaatgtg
gcctttggagcctttgaccagtggtgggagagcaaggaagagaaggccaagccattccag
aatgcagccaaacagcaagccaaggaagaggacaaagaaaagatgaagctcaaagagcca
ggcatgctgtccctcgtagactgggccaagagtggcggtatcacaggcattgaggccttt
gcctttgggtcagggcttcgaggggccctgcggttgccttcattcaaggtaaaacggaaa
gagccatcagaaatttcagaggcgagtgaggaaaagaggcccaggccctctactccagct
gaggaagatgaagatgatcctgagcgagagaaggaagctggagaaccaggacgtccaggg
accaagcctccgaagcgagatgaagaacggggcaagacccaaggcaagcaccgaaaatcc
tttactctggacagtgaaggggaagaggcatcccaggagtcttcctcagagaaggatgag
gatgatgatgatgaagatgaggaagatgaagaacaggaggaagctgtggatgccaccaag
aaggaagcagaggcatcggatggtgaggatgaggacagtgactcgtcctcccagtgctct
ctgtatgcggattcagacggtgaaaatggcagcacatcagactccgagagtggcagctcg
tcttcctcttcctcatcgtcatcctcctcttcctcatcttcctcatcagagtcctcctct
gaggaagaggaacagtcagcagtcattccctcagcttcacccctcagagaagttccagag
ccccttccagctcctgatgagaagcctgagacagatgggcttgtagattcccctgtcatg
cctctctctgaaaaggagacatcgcccacacagcctgcaggccctgctgaagaaccacct
cctagtgtaccacagcctccagcagagccacctgctggaccaccagacgctgccccccgc
ctggatgagcgcccctcttctcctatccctctcctacccccacccaagaaacgccggaaa
actgtctccttctctgctgcagaggaggtaccagtcccagaaccttccacggctgcccca
ctgcaggccaagtcttctggtccagtctctcgaaaagtcccccgggtcgtagagcggacc
attcgtaacctccccctggaccatgcgtctctggtcaagagttggcctgaggaggtggcc
cgagggggtcggaatcgagctggaggtcgtgtgcgctctactgaagaagaggaggccact
gagtcagggacagaagtagacctggcagtactggctgacctggccctgaccccagcccga
cgtgggttggctaccctacccactggtgacgactcagaggccacagagacctcagatgag
gctgagcgcccaagccctctactcagccacatcctcttggaacacaactatgccctagcc
atcaagcccccacctaccacaccagcacctcggcccctggagccagctcctgcccttgct
gcactcttcagctctccagctgatgaagtcttagaggcccctgaggtggtggtggctgag
gcagaagagccaaagcaacagctgcagcagcagcagcatccagagcaggaaggagaggag
gaggaggaagatgaagaggaggagtccgagtcttcagaaagcagcagcagcagcagcagc
agtgatgaggaaggggcaatcaggaggcgtagcctccgctcccacactcgaagaagaagg
ccaccactcccacccccacccccaccacctccttcctttgagccgagaagtgaatttgag
cagatgaccatcctgtatgatatttggaactcaggccttgacttagaagacatgagctat
ttgcgactcacatatgaacggctgctgcagcagaccagtggtgctgactggcttaatgac
acccactgggtccagcacacaatcaccaacctaagcactccaaagcgcaaacgacggccc
caagacgggccccgggagcatcagacaggctctgcacgcagcgaaggttactaccccatc
agcaagaaggagaaagataaatacttggatgtgtgccctgtctcggcccggcagctggaa
ggtggagacactcaggggactaatcgggtgctttctgagcgacggtcagagcagcggcgg
ttactaagcgctattggcacctcagccatcatggacagtgatctgctaaagctaaaccag
ctcaagtttcggaagaagaaactccgatttggccggagccgtatccatgagtggggtctg
tttgccatggaacccattgccgctgatgagatggtgattgaatatgttggccagaacatc
cgccagatggtagctgacatgcgggagaagcgctacgtgcaggagggcattggcagcagc
taccttttccgggtggatcatgacaccatcattgatgccaccaagtgtggcaacctcgcc
aggttcatcaaccactgctgcacgcccaactgctatgctaaggtgatcaccattgagtct
cagaagaagattgtgatctactcgaagcagcccatcggtgtggacgaggagatcacctac
gactacaagttcccactggaagacaacaagattccgtgtctgtgcggcactgaaagttgc
cgtggctccctcaactga
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integrated database retrieval system
