Mus caroli (Ryukyu mouse): 110304670
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Entry
110304670 CDS
T05910
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X2
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04721
Synaptic vesicle cycle
mcal04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
110304670 (Slc6a4)
04721 Synaptic vesicle cycle
110304670 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110304670 (Slc6a4)
Transporters [BR:
mcal02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110304670 (Slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110304670
NCBI-ProteinID:
XP_021031804
Ensembl:
MGP_CAROLIEiJ_G0016768
UniProt:
A0A6P5QF84
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Position
11:71927076..71960836
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AA seq
507 aa
AA seq
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MAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIIAWA
LYYLISSFTDQLPWTSCKNSWNTGNCTNYFAQDNVTWTLHSTSPAEEFYLRHVLQIHQSK
GLQDLGTISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGATLP
GAWRGVAFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALV
TSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFF
AIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCILGSLLTLTS
GGAYVVTLLEEYATGPAVLTVALIEAVVVSWFYGITQFCSDVKEMLGFSPGWFWRICWVA
ISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSVICIPIYIIYRLISTPGT
LKERIIKSITPETPTEIPCGDIRMNAV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccatctttggggggatcccgctcttctacatggagctcgcgctgggccagtaccac
cgaaatgggtgcatttctatatggaggaagatctgcccgattttcaaaggcattggctat
gccatctgcatcattgccttttatatcgcctcctactataacaccatcatagcctgggca
ctctactacctcatctcctccttcacggaccagctgccctggaccagttgcaagaactct
tggaacactggcaactgcaccaactacttcgcccaggacaatgtcacctggacactccat
tccacgtcacctgctgaagagttttacttgcgccatgtcctgcagatccatcagtcaaag
ggactccaggacctggggaccatcagctggcagctggctctctgcatcatgctcatcttc
accattatctacttcagcatctggaaaggagtcaaaacatctggcaaggtggtgtgggtg
acagccaccttcccttacattgtcctttctgttctgctggtgaggggagccacccttcct
ggagcctggagaggggttgccttttacttgaaacccaactggcagaaactcttggagaca
ggggtgtgggttgatgctgcagctcagatcttcttctctcttggcccggggtttggggtt
ctcctggcttttgctagctacaacaaattcaataacaactgttaccaagatgccctggtg
accagtgtggtgaactgcatgacgagcttcgtctctggctttgtcatcttcacggtgctt
ggctacatggctgagatgaggaatgaagacgtgtccgaggtggccaaagatgcgggcccc
agcctccttttcatcacatatgcggaggcaatagctaacatgccagcatccacattcttt
gccatcatcttcttcctcatgttaatcacgctgggtttggatagcacgttcgcaggtctg
gaaggtgtgatcacagctgtgttggatgagtttcctcacatctgggctaagcgcagggaa
tggtttgtgctcatcgtggtcatcacttgcatcttgggatccctgctcacactgacatca
ggaggggcgtatgtggtgaccctgctggaggagtacgccacggggccagcagtgctcact
gtggctctcatcgaggccgtcgtcgtgtcttggttctatggaatcacccagttctgtagc
gacgtgaaggaaatgctgggcttcagccccggatggttttggaggatctgctgggtggcc
atcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccaccccaactc
cggcttttccaatacaattatccccactggagtatcatcttgggctactgcataggaaca
tcgtctgtcatctgcatccctatatacatcatttatcggctgatcagcactccagggaca
cttaaggagcgcattattaaaagtatcactcctgaaacaccaacggaaattccgtgtggg
gacatccgcatgaatgctgtgtaa
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