Mus caroli (Ryukyu mouse): 110305122
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Entry
110305122 CDS
T05910
Symbol
Grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04020
Calcium signaling pathway
mcal04024
cAMP signaling pathway
mcal04080
Neuroactive ligand-receptor interaction
mcal04713
Circadian entrainment
mcal04720
Long-term potentiation
mcal04724
Glutamatergic synapse
mcal05010
Alzheimer disease
mcal05014
Amyotrophic lateral sclerosis
mcal05017
Spinocerebellar ataxia
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05030
Cocaine addiction
mcal05031
Amphetamine addiction
mcal05033
Nicotine addiction
mcal05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110305122 (Grin2c)
04024 cAMP signaling pathway
110305122 (Grin2c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110305122 (Grin2c)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
110305122 (Grin2c)
04720 Long-term potentiation
110305122 (Grin2c)
09159 Environmental adaptation
04713 Circadian entrainment
110305122 (Grin2c)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110305122 (Grin2c)
05014 Amyotrophic lateral sclerosis
110305122 (Grin2c)
05017 Spinocerebellar ataxia
110305122 (Grin2c)
05020 Prion disease
110305122 (Grin2c)
05022 Pathways of neurodegeneration - multiple diseases
110305122 (Grin2c)
09165 Substance dependence
05030 Cocaine addiction
110305122 (Grin2c)
05031 Amphetamine addiction
110305122 (Grin2c)
05033 Nicotine addiction
110305122 (Grin2c)
05034 Alcoholism
110305122 (Grin2c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110305122 (Grin2c)
Ion channels [BR:
mcal04040
]
Ligand-gated channels
Glutamate (ionotropic)
110305122 (Grin2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
110305122
NCBI-ProteinID:
XP_029340030
Ensembl:
MGP_CAROLIEiJ_G0017392
UniProt:
A0A6P7RWH9
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Position
11:complement(111092576..111110747)
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AA seq
1239 aa
AA seq
DB search
MGGALGPALLLTSLLGAWAGLGAGQGEQAVTVAVVFGSSGPLQGQARTRLTPQNFLDLPL
EIQPLTVGVNNTNPSSILTQICGLLGAARVHGIVFEDNVDTEAVAQLLDFVSSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPKAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYRRQYGTLPAPAGDCRSHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLYMKYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSSGDITPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICHNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WKLRHSVPSSSQLDFLLAFSRGIYSCFNGVQSLPSPARPPSPDLTAGSAQANVLKMLQAA
RDMVSTADVSGSLDRATRTIENWGNNRRAPAPTTSGPRSCTPGPPGQPSPSGWRSPGGGR
TPLARRAPQPPARPATCAGSPQPDVSRASCRHAWDARWPVRVGHQGSHLSASERRALPER
SRLHAHCHYSSFPRAERSGRPFLPLFPEPPEPDDLPLLRPEQLARREALLRAAWARGPRP
RHASLPSSMAEAFTRSNPLPARCSGHACACPCPQSRPSCQHVAQTQSLRLPSYREACVEG
VPAGVAATWQPRQHVCLHTHTHLPFCWGTVCRHPPPCASHSPWLIGTWEPPSHRGRTLGL
GTGYRDSGVLEEVSREACGTQGFPRSCTWRRISSLESEV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagccctggggcccgccctgcttctcacttcactccttggtgcttgggcaggg
ctgggcgcagggcagggagaacaggccgtgaccgtggcggtggtgtttggcagctctggg
ccactgcagggccaggcccggactcgtctcaccccccagaacttcctggacttgcctctg
gagatccagccactcaccgtcggggtcaacaataccaaccccagcagcatcctcacccaa
atctgtgggctcctgggtgccgcccgagtccacggcatcgtctttgaggacaacgtggac
actgaggccgtggcccagctgctggatttcgtctcctctcagacccacgtgcccatcctc
agcatcagtggaggttccgctgtggtcctcactcccaaggagccaggctccgcctttcta
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggaatac
gactggagcgcgttcgctgtcatcaccagcctgcacccgggccacgcgctcttcctcgag
ggcgtgcgcgccgtcgccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggagctgggccccggtgggccgcgagcgcgcactcagcgcttactgcgccaggtcgac
gcgccggtgctggtggcctactgctcccgtgaagaggcggaggtgctcttcgcggaggct
gcacaggctggcttggtgggacccggtcacgtgtggttggtacctaacctggcgctggga
agcaccgacgctccccctaaagccttcccggtgggcctcatcagtgtggtcaccgagagt
tggcgccttagcctacgccagaaagtccgcgacggtgtggccattctggccctcggtgcc
cacagctaccgacgccagtacggtaccctgccagccccggctggagactgccgaagccac
ccaggacccgtcagccctgccagggaggccttctacaggcatctgctgaatgtcacctgg
gagggccgagacttctcttttagccctggtgggtacctggtccagcccaccatggttgtg
atcgctctcaaccggcatcgcctctgggagatggtgggacgatgggatcatggtgtcctg
tacatgaaatatccagtgtggcctcgctacagtacttctctacagcctgtggtggacagc
cggcacctgacagtggccacactggaagaaaggccctttgtcattgtggagagccctgac
cctggcacagggggctgtgttcccaacactgtgccctgccgtagacagagcaaccacacc
ttcagcagcggggatataaccccctacaccaagctctgttgtaagggcttctgcatcgac
atcctcaagaagctggccaaggtggtcaagttctcctacgacttgtacctggtgaccaac
ggcaagcacggcaagagggttcgtggtgtgtggaatggtatgatcggggaggtatactac
aagcgggcagacatggccatcggctccctcaccatcaatgaggagcgctcggagattata
gacttctctgtgccttttgtggagaccggcatcagtgtgatggtggcaaggagcaatggc
accgtctccccctcggcttttctggaaccctacagccctgccgtgtgggtgatgatgttt
gtaatgtgcctcacggtggttgccatcactgtcttcatgttcgagtatttcagccctgtc
agctacaaccagaatctcaccaagggcaagaagtcaggtggaccatccttcaccattggc
aagtccgtgtggttgctgtgggcactggtcttcaacaactctgttcccatcgagaacccc
cggggcaccaccagcaagatcatggtcctggtgtgggccttcttcgctgtcatcttcctc
gctagctacacggccaatctggcagccttcatgatccaggaacaatacatcgacactgtg
tcgggccttagtgacaagaagtttcagcggcctcaagaccaatacccacccttccgtttt
ggcacggtacctaatggcagcacagagaggaacattcgtagcaactatcgtgatatgcac
actcacatggtcaagttcaaccagcgctcggtggaggatgctctcacaagcctgaagatg
gggaagctggatgccttcatctatgatgccgccgtcctcaactacatggcgggcaaggat
gaaggctgcaagctggtcaccattggatctggcaaagtctttgccaccactggctatggc
attgccatgcagaaagactcccactggaagcgggccatagacctggcactcctgcagttc
ctgggggatggggagacacagaagctggagacagtgtggctctcagggatctgccataac
gagaagaacgaggtgatgagcagcaagctggacattgacaacatggcgggcgtcttctac
atgctgttggtggccatggggctggcccttctggtctttgcctgggagcacctggtctat
tggaaacttcgacactcggtgcccagctcatcccagctggacttcctgctggctttcagc
aggggcatctacagctgcttcaacggggtacagagccttccgagccctgcgcggccgccc
agcccggaccttacagcaggctcagcccaggccaatgtgttgaagatgctgcaggcggct
cgagacatggtgagcacagcggacgtgagcggctctttggaccgcgccactcgcaccatc
gagaactggggcaacaaccgtcgcgcgcctgctcccaccacctccggcccgcggtcatgc
accccgggtcctccgggacaaccgagtcccagcggctggcggtctcccggtgggggccgc
accccgctagcgcgccgggccccgcagcctcccgctcgccccgcgacctgcgcagggtcg
cctcagcccgacgtgtcccgagcatcctgcaggcacgcttgggatgcacggtggccagtg
cgagtagggcatcagggatcgcacctctcggcctccgagcggcgcgcgcttccggagcgc
tcccggttgcacgcgcactgccactacagttccttccctcgagcagagaggtcagggcgc
ccatttctcccgctattcccggagcccccggagcctgacgacctgccgctgctccggccg
gaacagctggctcggcgggaggctctgctgcgcgcggcctgggccaggggcccgcgccct
cgccacgcttccctgcccagctccatggcagaagccttcactcgatccaaccctctgcct
gccaggtgttccggtcacgcctgcgcttgcccatgcccccaaagccggccatcctgtcag
cacgtggctcaaacacagtcgttgcggctgccgtcctaccgggaggcctgtgtggagggc
gtgccagcaggggtggccgccacctggcagcccagacagcatgtctgcctgcacacccat
acccacctgccattctgctgggggactgtctgccgtcaccctccaccctgtgccagccac
agcccctggctcattggaacctgggagcctccatcacacagaggcaggaccctggggcta
ggtacaggctacagggacagtggggtgctggaagaggtcagcagggaagcttgtgggaca
caagggtttccaaggtcctgcacctggaggcggatctccagcctggaatcagaagtgtga
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integrated database retrieval system