KEGG   Mus caroli (Ryukyu mouse): 110305122
Entry
110305122         CDS       T05910                                 
Symbol
Grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04020  Calcium signaling pathway
mcal04024  cAMP signaling pathway
mcal04080  Neuroactive ligand-receptor interaction
mcal04713  Circadian entrainment
mcal04720  Long-term potentiation
mcal04724  Glutamatergic synapse
mcal05010  Alzheimer disease
mcal05014  Amyotrophic lateral sclerosis
mcal05017  Spinocerebellar ataxia
mcal05020  Prion disease
mcal05022  Pathways of neurodegeneration - multiple diseases
mcal05030  Cocaine addiction
mcal05031  Amphetamine addiction
mcal05033  Nicotine addiction
mcal05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    110305122 (Grin2c)
   04024 cAMP signaling pathway
    110305122 (Grin2c)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    110305122 (Grin2c)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    110305122 (Grin2c)
   04720 Long-term potentiation
    110305122 (Grin2c)
  09159 Environmental adaptation
   04713 Circadian entrainment
    110305122 (Grin2c)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110305122 (Grin2c)
   05014 Amyotrophic lateral sclerosis
    110305122 (Grin2c)
   05017 Spinocerebellar ataxia
    110305122 (Grin2c)
   05020 Prion disease
    110305122 (Grin2c)
   05022 Pathways of neurodegeneration - multiple diseases
    110305122 (Grin2c)
  09165 Substance dependence
   05030 Cocaine addiction
    110305122 (Grin2c)
   05031 Amphetamine addiction
    110305122 (Grin2c)
   05033 Nicotine addiction
    110305122 (Grin2c)
   05034 Alcoholism
    110305122 (Grin2c)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mcal04040]
    110305122 (Grin2c)
Ion channels [BR:mcal04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   110305122 (Grin2c)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor NMDAR2_C
Other DBs
NCBI-GeneID: 110305122
NCBI-ProteinID: XP_029340030
Ensembl: MGP_CAROLIEiJ_G0017392
UniProt: A0A6P7RWH9
LinkDB
Position
11:complement(111092576..111110747)
AA seq 1239 aa
MGGALGPALLLTSLLGAWAGLGAGQGEQAVTVAVVFGSSGPLQGQARTRLTPQNFLDLPL
EIQPLTVGVNNTNPSSILTQICGLLGAARVHGIVFEDNVDTEAVAQLLDFVSSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPKAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYRRQYGTLPAPAGDCRSHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLYMKYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSSGDITPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICHNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WKLRHSVPSSSQLDFLLAFSRGIYSCFNGVQSLPSPARPPSPDLTAGSAQANVLKMLQAA
RDMVSTADVSGSLDRATRTIENWGNNRRAPAPTTSGPRSCTPGPPGQPSPSGWRSPGGGR
TPLARRAPQPPARPATCAGSPQPDVSRASCRHAWDARWPVRVGHQGSHLSASERRALPER
SRLHAHCHYSSFPRAERSGRPFLPLFPEPPEPDDLPLLRPEQLARREALLRAAWARGPRP
RHASLPSSMAEAFTRSNPLPARCSGHACACPCPQSRPSCQHVAQTQSLRLPSYREACVEG
VPAGVAATWQPRQHVCLHTHTHLPFCWGTVCRHPPPCASHSPWLIGTWEPPSHRGRTLGL
GTGYRDSGVLEEVSREACGTQGFPRSCTWRRISSLESEV
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgggtggagccctggggcccgccctgcttctcacttcactccttggtgcttgggcaggg
ctgggcgcagggcagggagaacaggccgtgaccgtggcggtggtgtttggcagctctggg
ccactgcagggccaggcccggactcgtctcaccccccagaacttcctggacttgcctctg
gagatccagccactcaccgtcggggtcaacaataccaaccccagcagcatcctcacccaa
atctgtgggctcctgggtgccgcccgagtccacggcatcgtctttgaggacaacgtggac
actgaggccgtggcccagctgctggatttcgtctcctctcagacccacgtgcccatcctc
agcatcagtggaggttccgctgtggtcctcactcccaaggagccaggctccgcctttcta
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggaatac
gactggagcgcgttcgctgtcatcaccagcctgcacccgggccacgcgctcttcctcgag
ggcgtgcgcgccgtcgccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggagctgggccccggtgggccgcgagcgcgcactcagcgcttactgcgccaggtcgac
gcgccggtgctggtggcctactgctcccgtgaagaggcggaggtgctcttcgcggaggct
gcacaggctggcttggtgggacccggtcacgtgtggttggtacctaacctggcgctggga
agcaccgacgctccccctaaagccttcccggtgggcctcatcagtgtggtcaccgagagt
tggcgccttagcctacgccagaaagtccgcgacggtgtggccattctggccctcggtgcc
cacagctaccgacgccagtacggtaccctgccagccccggctggagactgccgaagccac
ccaggacccgtcagccctgccagggaggccttctacaggcatctgctgaatgtcacctgg
gagggccgagacttctcttttagccctggtgggtacctggtccagcccaccatggttgtg
atcgctctcaaccggcatcgcctctgggagatggtgggacgatgggatcatggtgtcctg
tacatgaaatatccagtgtggcctcgctacagtacttctctacagcctgtggtggacagc
cggcacctgacagtggccacactggaagaaaggccctttgtcattgtggagagccctgac
cctggcacagggggctgtgttcccaacactgtgccctgccgtagacagagcaaccacacc
ttcagcagcggggatataaccccctacaccaagctctgttgtaagggcttctgcatcgac
atcctcaagaagctggccaaggtggtcaagttctcctacgacttgtacctggtgaccaac
ggcaagcacggcaagagggttcgtggtgtgtggaatggtatgatcggggaggtatactac
aagcgggcagacatggccatcggctccctcaccatcaatgaggagcgctcggagattata
gacttctctgtgccttttgtggagaccggcatcagtgtgatggtggcaaggagcaatggc
accgtctccccctcggcttttctggaaccctacagccctgccgtgtgggtgatgatgttt
gtaatgtgcctcacggtggttgccatcactgtcttcatgttcgagtatttcagccctgtc
agctacaaccagaatctcaccaagggcaagaagtcaggtggaccatccttcaccattggc
aagtccgtgtggttgctgtgggcactggtcttcaacaactctgttcccatcgagaacccc
cggggcaccaccagcaagatcatggtcctggtgtgggccttcttcgctgtcatcttcctc
gctagctacacggccaatctggcagccttcatgatccaggaacaatacatcgacactgtg
tcgggccttagtgacaagaagtttcagcggcctcaagaccaatacccacccttccgtttt
ggcacggtacctaatggcagcacagagaggaacattcgtagcaactatcgtgatatgcac
actcacatggtcaagttcaaccagcgctcggtggaggatgctctcacaagcctgaagatg
gggaagctggatgccttcatctatgatgccgccgtcctcaactacatggcgggcaaggat
gaaggctgcaagctggtcaccattggatctggcaaagtctttgccaccactggctatggc
attgccatgcagaaagactcccactggaagcgggccatagacctggcactcctgcagttc
ctgggggatggggagacacagaagctggagacagtgtggctctcagggatctgccataac
gagaagaacgaggtgatgagcagcaagctggacattgacaacatggcgggcgtcttctac
atgctgttggtggccatggggctggcccttctggtctttgcctgggagcacctggtctat
tggaaacttcgacactcggtgcccagctcatcccagctggacttcctgctggctttcagc
aggggcatctacagctgcttcaacggggtacagagccttccgagccctgcgcggccgccc
agcccggaccttacagcaggctcagcccaggccaatgtgttgaagatgctgcaggcggct
cgagacatggtgagcacagcggacgtgagcggctctttggaccgcgccactcgcaccatc
gagaactggggcaacaaccgtcgcgcgcctgctcccaccacctccggcccgcggtcatgc
accccgggtcctccgggacaaccgagtcccagcggctggcggtctcccggtgggggccgc
accccgctagcgcgccgggccccgcagcctcccgctcgccccgcgacctgcgcagggtcg
cctcagcccgacgtgtcccgagcatcctgcaggcacgcttgggatgcacggtggccagtg
cgagtagggcatcagggatcgcacctctcggcctccgagcggcgcgcgcttccggagcgc
tcccggttgcacgcgcactgccactacagttccttccctcgagcagagaggtcagggcgc
ccatttctcccgctattcccggagcccccggagcctgacgacctgccgctgctccggccg
gaacagctggctcggcgggaggctctgctgcgcgcggcctgggccaggggcccgcgccct
cgccacgcttccctgcccagctccatggcagaagccttcactcgatccaaccctctgcct
gccaggtgttccggtcacgcctgcgcttgcccatgcccccaaagccggccatcctgtcag
cacgtggctcaaacacagtcgttgcggctgccgtcctaccgggaggcctgtgtggagggc
gtgccagcaggggtggccgccacctggcagcccagacagcatgtctgcctgcacacccat
acccacctgccattctgctgggggactgtctgccgtcaccctccaccctgtgccagccac
agcccctggctcattggaacctgggagcctccatcacacagaggcaggaccctggggcta
ggtacaggctacagggacagtggggtgctggaagaggtcagcagggaagcttgtgggaca
caagggtttccaaggtcctgcacctggaggcggatctccagcctggaatcagaagtgtga

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