Microbacterium caowuchunii: F6J84_04000
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Entry
F6J84_04000 CDS
T07216
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
mcaw
Microbacterium caowuchunii
Pathway
mcaw00190
Oxidative phosphorylation
mcaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaw00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
F6J84_04000
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F6J84_04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaw03019
]
F6J84_04000
Enzymes [BR:
mcaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
F6J84_04000
Messenger RNA biogenesis [BR:
mcaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F6J84_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
UPF0147
DUF6616
Motif
Other DBs
NCBI-ProteinID:
QEV99354
LinkDB
All DBs
Position
complement(851642..853810)
Genome browser
AA seq
722 aa
AA seq
DB search
MIPDEMLDSGLGDADDDDFDSAVGIADAELPDHRYLDRELSWLSFNQRVLELGEDPRVPA
LERANFLAIFGSNLDEFFMVRVAGLKRRIITGLALPSNVGRAAQDVLADISRDAHALQLR
HAEAWQSLVKPALADAGIEVIGWGDLDETDRETLHDYFQAQVFPVLMPLAVDPAHPFPYI
SGLSLNLAIRVRNAKTGRQEFARLKVPPMLPRFVRVSRDGDHARYLPLEDLISNHLGDLF
PGMEILDHHAFRLTRNEDVVIEEDETENLIQALEAELLRRRFGPPIRLEITDDMDDLTLD
LLLKELDITEQEVYRLPGPLDLRGLFDLSRIDRPDLHFPPHVPTTAVAFQPGDNNERPDI
FAAIRKGDVLVHHPYESFATSVQAFLEQAAKDPHVLAIKQTLYRTSGDSPIVQALIDAAE
AGKQVLALVEVKARFDEANNIVWARKLEKAGVHVVYGLVGLKTHCKLALVIRQEGGVLRS
YSHVGTGNYNPKTSRIYEDLGLFTVDPDVGRDLTRLFNELSGYAIEKKFKRLLVAPLHLR
KGLIRLIDRERRNAESGKLAGIRIKVNSMVDEQIIDALYRASQAGVPIQIWVRGICSIRP
GVPGMSENITVRSILGRYLEHSRIFAFRNDGDPQAYIGSADMMHRNLDRRVEALVRIAAP
EQVAELNDLFALAMSDETSSWWLGEDGVWTRHSADADGAPLTDIQDKTMAMVQRRRRSRA
VR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgacgagatgctcgactccgggctcggcgacgcggatgacgacgacttcgac
tcggccgtaggcatcgcggatgccgaactgcccgaccaccgctatctcgaccgcgagctg
agctggctctcgttcaaccagcgcgtgctggaactgggcgaggacccgcgggtcccggcg
ctcgaacgtgccaacttcctcgcgatcttcggcagcaacctcgacgagttcttcatggtc
cgcgtcgccgggctcaaacgccgcatcatcaccgggctcgcactcccctccaacgtcggg
cgcgcggcgcaggacgtgctcgccgacatctcccgcgatgcgcacgcgctgcagctgcgg
cacgccgaggcgtggcagagcctggtcaagcccgcgctggcggacgccggcatcgaggtc
attggatggggcgacctcgacgagaccgaccgcgagacgctgcacgactacttccaggcg
caggtcttccccgtgctcatgccgctcgcggtcgatccggcccaccccttcccctacatc
tccgggctctccctcaacctcgcgatccgggtgcgcaacgccaagaccggccgccaggag
ttcgcccggctcaaggtgccgccgatgctgccccgcttcgtgcgggtctcccgcgacggc
gaccacgcccgctacctgccgttggaggacctcatctccaaccacctcggggacctcttc
cccgggatggagatcctcgaccaccacgcgttccggctcacccgcaacgaggacgtcgtg
atcgaggaggacgagaccgagaacctcatccaggcgctagaggcggagctgctgcgccgg
cggttcggtcccccgatccggctcgagatcaccgacgacatggacgacctgacgctcgac
ctgctcctgaaggagctcgacatcaccgagcaggaggtctaccggctccccggcccgctc
gacctgcgtgggctgttcgacctgtcccgcatcgaccgccccgacctgcacttcccgccg
cacgtgcccaccaccgcggtggcgttccagccgggcgacaacaacgaacgccccgacatc
ttcgcggcgatccgcaagggggacgtgctcgtccaccacccgtacgagtcgttcgcgacc
agtgtgcaggcgttcctggagcaggcggcgaaggatccccacgtcctggccatcaagcag
accctctaccgcacctccggcgacagcccgatcgtgcaggcgctcatcgacgccgccgag
gcgggcaagcaggtgctcgcgctcgtcgaggtgaaggcacgcttcgacgaggcgaacaac
atcgtctgggcacgcaagctcgagaaggccggcgtccacgtggtctacggcctcgtcggg
ctgaagacccactgcaagctcgcactcgtcatccgccaggagggcggcgtgctgcgcagt
tacagccacgtcggcacgggcaactacaacccgaagaccagccgaatctacgaggacctc
ggcctgttcacggtcgacccggatgtcggccgcgatctgacccggctcttcaacgaactc
agcggctacgccatcgagaagaagttcaagcgcctcctggtcgccccgctgcacctgcgc
aagggcctcatccggctgatcgaccgggagcgtcggaacgccgagagcggcaagctcgcc
ggcatccgcatcaaggtcaactcgatggtcgatgagcagatcatcgacgcgctctaccgg
gcgagtcaggccggggtgccgattcagatctgggtgcgcggcatctgcagcatccgcccg
ggtgtcccggggatgagcgagaacatcacggtgcgctcgatcctcgggcggtacctcgag
cactcgcggatcttcgccttccgcaacgacggcgacccgcaggcctacatcggcagcgcc
gacatgatgcaccggaacctggaccgccgggtcgaagcgctcgtgcgcatcgccgcaccc
gagcaggtggccgagctcaacgacctcttcgccctggccatgagcgacgagaccagctcg
tggtggctcggtgaggacggcgtctggacccggcattccgcggatgccgacggcgcgccg
ctgaccgacatccaggacaagacgatggcgatggtgcagcggcgccgccgctcccgcgcg
gtgcgatga
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