Mugil cephalus (flathead mullet): 125007833
Help
Entry
125007833 CDS
T08342
Symbol
polr2b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03020
RNA polymerase
mcep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125007833 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
125007833 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125007833 (polr2b)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125007833 (polr2b)
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125007833 (polr2b)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125007833 (polr2b)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125007833 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
125007833
NCBI-ProteinID:
XP_047440632
LinkDB
All DBs
Position
5:complement(29550914..29562691)
Genome browser
AA seq
1171 aa
AA seq
DB search
MYDQDEDNQYDEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVFRGCG
GTPPPIQNPRGEPNHLWGVEGPGEGHEGPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEA
RLRNLTTGPPVLLTLTKTYKGGGDRCRPNTKNPIGKIPLMLRSPYCLLRGLKDRTCVXLN
EWALDPGGVFSLFNGLRREMGKRARNGPRKSVSTLPYIRQEVPIIIVFRALGFVSDRDIL
EHIIYDFDDPEMMEMVKPSLDEAFVIQEQNVALNFILGSRGAKPGVTKEANQKTFKKVLQ
KEMRAPVGVSDFCEGQKARFLWVYRVRFLHFGRRELAQDITATRGWTLWGPLLAFLFRGM
FKNLLKEIRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGKIWGCLRERVNPARGG
ILQVLKPFSFASTLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKN
LALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMN
TLRKLRRQMDIIVSEVTPSVSDRKTQPQAVYWAPDPVLPSQVPTGPGSFCSRLPGSTVLD
PVLRKPVLFGPGSPCPPGGTGPGSCAPAPRFYWSPGVPGSCDRVLIPGSQGPAGSQVLLV
LDPRSFGSCAPVAWFYGPGFRGLPRRFPLVPGPCGFPQPGFLVLCPGQIRWQDLFGGGGV
WSKSTTGGEETVPGRHDPRYLPKKRALGPTAQTHTHCEIHPSMILGVCASIPSPFPPPSR
APRNTYPSAMGKQGLGVYINPKFQGRMGTRPTSFYYPPKTLWANPSVQRRINSLVAXGPV
SGYNQEDSVIMNRSAVDRGFFSARFLFFGPGGGSGSSGGRGTLPEKNDDELDTPKPGATQ
RTAAPSPRTPRKTPFLGQVYGYPKTRERTETSFASRHGQKGTCGIQYRQEDMPFTCEGIT
PDIIINPSPXPSRWVTVGPLIEMGLQGKRVSANKGEIGDATPFNDAVNVQKVSNLLSEYG
YHLRGNEVLYNGFTGRKLTSQNLYLGPLIFRLKKIGGRXKNQIGARGPLPILNRQPDGGL
RFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKE
TRISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3518 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataatcagtacgacgaggacgaggatgaaatcactccagat
ctgtggcaggaagcctgttggatcgtcatcagctcttattttgacgagaagggtctggtg
cggcagcagctggattcgtttgatgagttcatccagatgtctgtttttagaggttgtggg
gggacgcccccccccatccaaaaccccaggggtgaacccaaccacctctggggggtggag
gggccgggggagggccacgaggggcctcgttacctgctgaagttcgagcagatctacctg
tcgaagcccacccactgggagagagacggagctccatctcccatgatgcccaatgaggca
cgactacggaatctgactaccggcccccctgttttgttgaccctcacaaagacatataaa
ggagggggggatcgctgcagacccaacaccaaaaaccccatcggtaaaattcccctcatg
cttcgctccccctactgcctgctcagggggcttgaaaggacaggacctgtgtttaactca
acgaatgggccctggaccccgggggggttttttctttattcaacggcttgagaagggaaa
tgggaaaaagagcgcgaaacggtccgaggaaaagtgtgtccacgctgccctacatcagac
aggaagttcccatcatcattgtgtttcgagctctgggcttcgtgtctgacagagacatcc
tggaacacatcatttatgactttgatgaccccgagatgatggagatggtgaagccgtctc
tggacgaagcgtttgtcatccaggagcagaacgtggccctgaactttattttgggatcca
gaggagcgaaacccggtgtaacaaaagaggcgaatcaaaaaacgtttaaaaaagttcttt
tcagaaagaaatgcgggccccagtcggggtcagcgacttctgtgagggccaaaaagcccg
gtttctttgggtttacagggtgcgctttctgcactttgggagacgagagctggcacagga
tattacggcaacaagaggctggaccttgtgggggccactactggccttcctgttcagagg
tatgttcaagaacctgctcaaagagatcaggatttatgctcagaagttcattgacagagg
aaaagacttcaacttggagctcgccatcaagactcgaatcatctcagatggactcaaata
ttcgctggccactggaaaaatttgggggtgtttaagggaaagggtcaacccggcccgggg
cgggattttacaggttttaaaacccttttccttcgcatccactctgtcccacctccgtcg
agtcaactctcctattggccgagatggaaaactggcaaaacctcgacagcttcacaacac
actttggggaatggtgtgtccagccgagacccccgagggtcacgctgtgggtctggtgaa
gaacctggccctcatggcctacatctctgtgggctcacagccgtcccccatcctggagtt
tctggaggagtggagtatggagaacttggaggaaatctcacctgctgccattgctgatgc
cactaaaatctttgtgaacggctgctgggttggaattcacaaagacccagaacagttgat
gaacacactgaggaagctccgaagacaaatggacattatcgtgtctgaggtaactccatc
tgtctctgacaggaaaacccagccacaggcagtttactgggccccggatcctgtgctccc
gagccaggttcccactggtccggggtccttttgctcccgtttgcccggttctacggtcct
ggatcctgtgctccgcaaaccggttctatttgggcccggatccccgtgccctcccggggg
tactgggccggggtcctgtgcccccgcccccaggttctactggtcccccggggttcccgg
ctcctgcgacagggttttaattcctggatcccagggtcctgcaggcagccaggttttgct
ggtcctggatccccggtcctttgggtcctgtgctcctgtagcctggttctacggtccggg
tttccgggggctcccccgacggttccccctggttcccggaccctgtgggttccctcagcc
aggtttcctggtcctgtgtcctggtcagatacgctggcaggacctttttgggggcggcgg
cgtgtggagtaaatcgacaactgggggggaggagacagtcccgggtcgccatgacccccg
atacctccccaaaaaaagggctttggggcccactgcccaaacccacacccactgtgaaat
ccacccatccatgatcctgggagtctgcgcctccatcccctccccttttcccccaccttc
ccgggctcccaggaacacgtacccgtcggctatggggaaacagggcctgggggtctacat
caacccaaaattccagggacgaatgggcacccggcccacgtccttttactaccccccaaa
aaccctttgggcaaacccctcggtccaaaggagaatcaattcccttgtggccaggccccg
tttcagggtacaaccaggaggattctgtgatcatgaacaggtccgctgtggatcgaggct
tcttcagcgcccggttcctgttttttgggcccgggggaggaagtgggtcatcggggggac
gggggacgcttccggaaaagaacgacgacgagctggacacacccaaacccggggctacac
aaagaactgcagccccttccccgagaaccccgcggaaaaccccatttttgggccaggttt
atggttaccctaaaacccgggaaaggacggagacaagttttgccagccgacacggacaga
agggaacctgtgggatccagtacagacaggaggacatgccgtttacctgcgaggggatca
cacctgacatcatcatcaacccttccccgcccctcccgctgggtgacagtcggccctctg
atcgaaatggggctgcagggaaaaagggtttctgcaaacaaaggggagattggagacgca
actccgttcaacgacgctgtcaacgtgcagaaggtgtcaaacctgttgtctgaatacgga
taccacctccgaggaaacgaggttctgtacaacggcttcactgggaggaagttgacgtcc
caaaatccctttatttggggccacttatttttaggttgaagaaaattgggggacgataaa
aaaaccaaatcggggcccgggggcccctcccgatcctcaacaggcagcccgatggcggcc
tgcgcttcggcgagatggagcgtgactgtcagatcgctcacggagccgctcagttcctca
gagagcgtctgttcgaggcgtccgatccctaccaggtccatgtctgcaacctgtgtggcc
tcatggccatcgccaacaccaggacgcacacgtacgagtgccgaggctgccgcaacaagg
aaacccggatctctctggtccggatgccgtacgcctgtaaacttcttttccaggagctga
tgtcgatgagcatcgctcctcgtatgatgacgtcatag
DBGET
integrated database retrieval system
