Mugil cephalus (flathead mullet): 125009204
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Entry
125009204 CDS
T08342
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1B
KO
K06527
vascular cell adhesion molecule 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125009204 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcep04090
]
125009204 (vcam1b)
04091 Lectins [BR:
mcep04091
]
125009204 (vcam1b)
CD molecules [BR:
mcep04090
]
Proteins
125009204 (vcam1b)
Lectins [BR:
mcep04091
]
I-type lectins (Siglecs)
125009204 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
ICAM1_3_5_D2
Ig_C17orf99
C1-set
REJ
Motif
Other DBs
NCBI-GeneID:
125009204
NCBI-ProteinID:
XP_047442890
EnsemblRapid:
ENSMGCG00000008872
LinkDB
All DBs
Position
6:28288112..28301832
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AA seq
823 aa
AA seq
DB search
MELSFFCRSFIHVVSVVLLTWSWCVQGLSVSVSQRKVLWRLRDRGQVVVSVKDCPSTPVM
SWSLMGDRHLPASIVNNATHSVVTFDPVSTEVDGTLACKVTCGAEGKQVTISVVVYSSPS
VPEVTGHDGLRVGVNSSLSCQVGDVFPPQLDLTWIRGDQVLQTDTRDSTSISVPSVFWFI
PEKHDMGQKITCRAALDLEDLPEENRTKETTVDLNVLYAPVVTAISDPVTVMAGSPVSLS
CSVEGNPEPVVVWSLRTEEGGSVEVGRGGTLDFRSVRASDTGTYECEARNTEGNHTAGVN
VTVNAPPTNASLSVSPGEEVVEGQRVTFTCSSDGAPPPTLVIRRKGVELKSNDSAPSSSL
TFSLDSALPGDSALYECSASNRFGSQTVKRSVTVRAHPLQVEASPQLSAERRSALILTCR
ASGCVHPPSLTWRRTDTGTGDGHGAVLQKTKQQDGTSQLHLQDLDLQDQGGYRCEAECDG
VVRTRDIQVHIYSFPSDPVLEDPGPVLLGSETSLRCDVLGVFSSNKLRLRWLSGNRMLDT
KSFGFSGSLRNVSYVLQHQVQEDEPVLTCRAELLTEDGHVWRSRNSSVSLQVHYAPRTPS
LSVSPGEGVQEGQRVTFTCRSDGAPPPTLVLRREGVELQRASSASSPLTFSLDSALLGDS
ALYECEASNQFGSQTVNRSVTVRAPPRNTTVLVLPSAEVQEGENVTICCRAVSFPQSVVV
LKKLANGTEMSSSNGTFLLVNVTARDSGLYQVNVTNELGYQVKVFSLSVRERSSRRPPSL
NAVVIPVACVAAALATTALVLDYLRRSRKKGFYQLPQSAPPSA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagctttttctgcaggagcttcattcacgtcgtctcagtcgtgctgctgacg
tggtcgtggtgcgttcagggacttagcgttagcgtgtcccagaggaaggttctgtggcgt
ctgagggaccggggccaggtggtggtctcggtgaaggactgcccctccacgccggtgatg
tcctggtctctgatgggggaccgccacctgccggcgtccatcgtcaacaacgctactcac
tcggtggtgacctttgacccagtgtccacggaggtggacgggacgctggcctgcaaagtc
acctgtggagcagagggcaaacaagtcacgatctcagtggtggtctactcttccccatca
gtccctgaggtcacgggtcacgacggtctgagggtcggcgtcaattccagcctctcctgc
caggtgggggacgtcttccctccacagctggacctcacctggatcagaggagaccaggtc
ctgcagacagacactcgagactccacgtccatttcagtcccgtccgtgttctggttcatc
cctgagaaacacgacatgggccagaagatcacctgcagggccgcgctggacctggaggac
ctaccggaggagaaccggaccaaggagaccaccgtggacctgaacgtcctctatgctccc
gttgtcacggcgatctcagacccagtgacggtgatggccggctctcctgtctccctcagc
tgctctgtggaggggaaccctgagccggtggtggtctggagcctcaggacggaggagggg
gggtcggtggaggtgggccgaggcgggacgctggacttcaggtcggtcagagcctccgac
accggaacctacgagtgtgaggcccgaaacacggagggaaaccatacggccggcgtgaac
gtcacggttaacgctccgcccaccaacgcctccctgtcggtgagtccaggtgaggaggtg
gtggagggtcagcgggtcacgtttacctgtagctcagatggagctccgccccccacactg
gtcatcagacgaaaaggggtggagcttaagagcaatgactccgccccctcctcctcgctc
accttcagccttgactccgccctccccggagactccgccctgtacgagtgttctgcctcc
aaccggtttggatcccagacggtcaaaaggtccgtcactgtcagagctcaccccctgcag
gtggaggcgagtcctcagctctcagccgagcgacgctccgccctcatcctgacctgccgg
gcgtccgggtgtgtccacccccccagcctcacctggaggaggacggacacggggacgggg
gacggacacggagccgtcctccagaagacgaagcagcaggacgggacgtctcagctccac
ctgcaggacctggacctccaggaccagggagggtacagatgtgaggccgaatgtgacggc
gtcgtccggaccagagacatccaggtccacatctactcgttcccgtctgatccggttctg
gaggaccccggtccggtgctgctgggctcggagacgtcccttcgctgtgacgtcctcggc
gtcttctcgtccaataagctgaggctccgctggctctctgggaaccggatgctggacacg
aagtcctttgggttctctggttccttacggaacgtctcctacgtcctccagcaccaggtc
caggaggacgagccggtcctgacctgccgggcggagctgctgacggaggacggacacgtg
tggaggtccaggaactccagcgtctccctgcaggttcactacgctccgaggacaccgtcc
ctgtccgtgagtccaggtgagggggtgcaggagggtcagcgggtcacgtttacctgtcgc
tcagacggagctccgcccccaacactggtgctcagacgagaaggggtggagcttcagagg
gctagctccgcctcctccccactcaccttcagccttgactccgccctcctcggagactcc
gccctctacgagtgtgaagcctccaaccagtttggatcccagacggtcaacaggtccgtc
actgtcagagctcctccgagaaacaccacggtcctcgtcctcccgtctgcagaggtccag
gagggagagaacgtcaccatctgctgccgggccgtgagcttccctcagtccgtggtggtt
ctgaagaaactggccaacgggacggagatgtcctcgtccaacgggacgttcctgttggtc
aacgtcacggccagagactcggggctgtaccaggtgaacgtgaccaacgagctcggatac
caggtcaaagtcttcagcctcagcgtcagagagagaagctccagacgtcctcccagcctc
aacgccgtcgtcatcccggtcgcctgcgtcgccgctgcactagcaaccaccgctctggtc
ctggactatctgaggaggtccaggaaaaaaggcttttatcagctccctcagtctgctcca
ccttcagcctga
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