Methanoculleus chikugoensis: MchiMG62_20680
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Entry
MchiMG62_20680 CDS
T07488
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mchk
Methanoculleus chikugoensis
Pathway
mchk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mchk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MchiMG62_20680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchk03021
]
MchiMG62_20680
Enzymes [BR:
mchk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MchiMG62_20680
Transcription machinery [BR:
mchk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MchiMG62_20680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_7
Fer4_9
Fer4
Fer4_6
Fer4_4
Fer4_8
Fer4_16
Fer4_2
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
BBL68887
LinkDB
All DBs
Position
2087968..2088798
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AA seq
276 aa
AA seq
DB search
MEIAFSRLDERVAKFTLSGVSTSFANMLRRAMISEVPTLAIEDVRIYDNTSVLFDEMLAH
RLGLIPLRTDLKVYKPRSECTCEGAGCSACTATYTLSVEGPKIVSSSDLIPQDPDAAPAE
EGIPIIELAKDQKVVLEAHAVVGTGKEHAKWQATTACGYKNYPIIAIDARCDGCGMCIDE
CPRNVLETAQGKVRVTEGRQELCSLCKLCERACLAGGIGTEAAIRIGTDAERFIFVVESD
GSMPVREIIERALQYIQRSSDDLVDVMNEITGEGTE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggagatagcgttttctcgactggatgagagagtcgccaaattcaccctgagcggcgtt
tcgacgtcgttcgccaatatgcttcggcgggcaatgatcagcgaagtgccgacgctcgcc
atcgaagatgtccgcatctacgacaacacgagcgttctcttcgacgagatgctggcgcac
cgcctgggactcattccgctccggacagacctcaaggtctacaaaccgcgcagcgagtgt
acctgcgaaggcgccgggtgctcggcctgcaccgcgacctatacgctctccgtcgagggg
ccgaagatcgtcagctcaagcgacctgataccgcaggatcccgacgccgcaccggcggag
gagggcatccccatcatcgaactcgcgaaagaccagaaggtcgtgctcgaagcgcacgca
gtcgtcggcaccggaaaagagcatgccaagtggcaggcgacgaccgcctgcggttacaag
aactaccccataatcgccatcgacgcgaggtgcgacgggtgcggcatgtgcatcgacgag
tgcccgaggaacgtgctcgagacggcgcagggaaaagtccgggtcaccgaagggcggcag
gaactctgttccctctgcaagctctgcgagcgggcatgccttgccggcgggatcggcact
gaagcggccatccgtatcggcacggacgccgagagattcatcttcgtggtggagagcgac
ggttcaatgcccgtccgcgagatcatcgagagagcgctacagtatatccagagatcatca
gacgacctggtagacgtgatgaacgagattacgggagaggggactgaatga
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