Melitaea cinxia (Glanville fritillary): 123656656
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Entry
123656656 CDS
T09237
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123656656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcix03021
]
123656656
Enzymes [BR:
mcix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123656656
Transcription machinery [BR:
mcix03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123656656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Nop14
RPAP3_C
Motif
Other DBs
NCBI-GeneID:
123656656
NCBI-ProteinID:
XP_045448274
EnsemblRapid:
ENSMCXG00005021331
LinkDB
All DBs
Position
9:complement(13885265..13891301)
Genome browser
AA seq
1653 aa
AA seq
DB search
MDFNARFTSALTGMTSVDPDSVQFLMFNDEDVKKLSVAKITNTTSFDSMGNPTKGGLYDP
ALGPIRERNDLCTTCSNSLINCSGHFGHIELPLIVVNPLFIKNIYTLFRVTCLKCFKIQM
DDRMKFILKLQLELLDAGHVTAALDLENYIGDVKDYKSESSPDKPNKVIRKYQKLLKKKD
ALNEMFQNKNTDRLRSKIINNFFRAINISKTCLHCRSKLIKVTTSDNKIMYNLSSEGSGK
GIKILMPDDLKRYCKSIEQNDEDILVHCIPLLQHAKTKPVTDLFFMQVVPVLPPNVRPCN
VLNGELIEHPQTNVYKSILQTALSARAVLQVLMSSDQLKAIDSLDQKPRQAYESVMGKSP
SEKLHTVWQDLQKQINQLLSCDNTGLASQGLKQILEKKTGVIRMHMMGKRVNFAARSVIT
PDPNVDIDEIGIPDAFATKLTYPVPVTEWNVDELRRMVINGPNKHPGAEKLEVTNGRIIR
IPPDSIQKRKSLAKKLLTPDEYKTSGLKIVHRHLINGDILILNRQPSLHKPSMMAHRARI
LQGEKTLRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVTKQYLVPKDGTPLS
GLIQDHVISGVRMSLRGTFFTKSDYQQLVFQALSNHKGEIKLLPPTILKPITLWSGKQVL
STIIINNIPKGKPYLSLTGKAKIGTKAWQKEQPKPWNAGGTPFTNPNEMSEAEVIIRKGE
LLCGVLDKTHYGATPYGLVHCMYDLYGGDSSSAILSSFSKGFTFYLQWIGFTLGVKDILV
VEEADKKRDEIIRLVRQAGRVAAVKATELPADVDESNLKETIGEMLIKDPKFRANLDRQY
KNMLDSYTNNINTVCLSEGLLEKFPENNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKR
PPLMISGRSLPSFPPFDISPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRS
GYLQRCLIKHLEGLSVAYDNTVRDADSSIIQFAYGEDGLDVLKCQFLKKDQFKFLDVNSN
AVVSKSTIKKLKEESDLKLIAKCKKSLKKWKKKNGSPFEKVRTSGFSQFSAVTKRYIVLD
DKPTDQTRDPFYWELEKMWRSLDEEEKQQYVKKRCPDPIPSKMSPEFKFGTINEQLDNLI
ENYLKNRNESAHNEYTEKDKFVEIIGAKYLASMAAPGEPVGLLAAQSIGEPSTQMTLNTF
HFAGRGDMNVTLGIPRLREILMTASAKLKTPSMDIPFLNNIPDINKKAERLRQKMNRVTV
SDVLEKIDVECEIVTTPDRQLKTTMHFVFLPYSQYKTQYAIKPPQIIKHMQNKFFDEMFA
VIRRQAKTTCGVLWAAEKEKKRRSAGSDDEEEEVIGAEPKEQVNDNVDIDSSDEEGPNDD
DDNTDVRNRKKHTEEQEYEDPESGEEEKSDDEGEDEQDAKDDDVTEVTQDDANSKIMANV
VENINNATNYSFDTKNHKWCELTVLFPISFLEVDLSQALRDAATRSVVYEIKHIKRAITN
KEKNVLYLKTEGINIVQMFKYNNLLDLNKLYSNDIHAIANTYGIEAANKVIIKEIQNVFN
VYGITVDPRHLSLVADYMTYNGVFEPMSRKGMESSTSPLQQMSFESSLIFLKEAVLNSKK
DFIRSASSCLMLGQPCRIGTGAFSLQHVSKVIS
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaacgcgaggtttacttccgctttgaccggaatgacatctgtcgatcctgat
tcggtacaatttcttatgtttaatgatgaagacgttaaaaaactaagtgtggcgaagata
actaacacgacgtctttcgattctatggggaaccctacgaagggtggtctctatgaccca
gcgttagggccaatcagagagcgaaatgatttatgtacaacatgttcaaacagccttatc
aattgttcagggcattttggacacattgaactaccactgattgttgtaaatccactgttt
attaaaaatatatatactctgtttcgagttacttgtctcaaatgctttaaaatacaaatg
gacgaccgcatgaaatttattttaaagttgcaactggaactacttgatgctggtcatgtc
acggctgcattagacttggaaaattatattggggatgtcaaagattataaaagtgaatca
tcaccagataaacctaataaagtcattaggaagtatcaaaaacttttaaaaaagaaagat
gcgctgaatgagatgtttcaaaacaaaaatacagatagattaagaagtaaaatcatcaat
aatttttttagagctataaatatatctaagacgtgtcttcactgcagaagcaaattgatc
aaagtaacaacatctgataacaagataatgtataatttaagttctgaaggaagtggaaaa
ggtattaaaatattaatgcccgacgatttaaaacgctattgcaaatcaatagaacaaaat
gatgaagatattcttgtacattgtattccattactccaacatgcaaaaactaaacctgtt
actgatttatttttcatgcaagttgttccagtactgccacctaatgtcagaccatgcaat
gtactaaatggagaattaattgagcaccctcagactaatgtatacaaaagtatattgcaa
actgcgctcagtgctagggcagtcttgcaagtcttaatgtcatctgatcaactaaaagcg
atagacagtcttgaccaaaaaccaaggcaagcatatgaaagtgttatgggtaaatcacca
tcagaaaaattgcacacagtttggcaagatttacagaaacaaataaaccaattacttagc
tgtgacaatacaggacttgctagtcaaggattaaaacaaatattagaaaagaaaactggt
gttataagaatgcatatgatgggtaaaagagtgaattttgcagctcgttcagttataaca
cctgatcctaatgttgatatagatgaaattggtattcctgatgcgtttgcaactaagctt
acttaccctgtgcctgttactgaatggaatgtggatgaattaagaaggatggtaataaat
ggaccaaataaacatccaggggctgaaaagttggaagtgacaaatggaaggataatcaga
ataccaccagattctattcaaaagcggaaaagtcttgcaaagaagttattgacacctgat
gaatataaaacatcagggttgaaaatagttcacagacacttaatcaacggtgatatactt
atattaaatcgtcaaccctctcttcataaaccaagtatgatggcccatagagcgagaatt
ctgcaaggtgaaaaaactcttagactccactatgcaaattgtaaatcatataacgctgat
tttgatggtgatgaaatgaatgcacattttccacaaaacgaaattgcaagaagtgaagca
tataatattatgtctgttacaaaacaatatcttgtgccaaaagacggaacacctctgagt
ggtttgattcaggatcatgtcatatcaggagtaaggatgtcattaagaggcacctttttt
acaaagtcagattaccaacaattagttttccaagcattatcgaatcacaaaggagaaatt
aaattgcttcctccgactattttaaagccaataacgttatggtctggtaagcaagtttta
tctacaattataattaacaatataccaaaaggaaaaccttatctttctttaactggaaag
gcaaagattggtacaaaggcatggcaaaaagaacaaccaaaaccttggaatgcgggtggt
actccttttacaaatccaaatgaaatgtccgaagcagaagtcatcattagaaaaggagaa
ctcttatgtggggtattagacaaaactcactatggagcaactccttatggtctggttcac
tgcatgtatgatttgtatggaggagacagttctagtgccattttaagttctttttctaag
ggattcactttttatttacaatggataggatttactcttggtgtaaaggacatcttagtt
gtggaagaggctgacaagaagcgtgatgaaataatacgtttagtacgacaggctggacga
gtcgctgctgtaaaagcaacggaactacctgcagacgttgatgaaagtaacctcaaagaa
actattggcgaaatgctaattaaagatccaaaattccgtgcgaatcttgacagacaatat
aaaaatatgttggactcatacactaataacatcaatactgtatgcttgtctgaaggattg
ttggaaaaatttcctgaaaataatcttcaactcatggtgcaatcaggagcaaaaggatca
actgttaatactatgcagatctcttgcttattaggtcaaattgaattggaaggcaagaga
cccccattaatgatttctggacgatcactacctagctttcctccatttgatatatcacca
agagcaggaggttttattgatggtcggttcatgactggaatacaaccacaagaattcttt
ttccattgtatggctggtagagaaggtcttattgatacagctgtaaaaactagtcgttca
ggctatttacaaagatgtttaataaaacatttagaaggattgagtgttgcttatgataat
acagtcagagatgccgatagtagcatcattcaatttgcatatggtgaagatggtcttgat
gttttgaaatgtcagttcttaaaaaaagatcaatttaagttccttgatgtaaattctaac
gcagtcgtttctaaatctactatcaagaaacttaaagaagaatcggacttaaagttaata
gctaaatgtaaaaaatccttaaagaaatggaaaaagaaaaacggaagtccttttgaaaaa
gtgagaacgagtggtttcagtcagttttctgcagttacaaaaagatatatcgttctagat
gataaaccgacagaccaaactagagatccattttactgggaattagaaaaaatgtggcgt
tccttggatgaagaagaaaaacagcaatatgtgaaaaaacggtgtcctgatccgatacca
agtaaaatgtctcctgagttcaagtttggtaccataaatgaacaattagataacctaatt
gaaaattatctaaaaaatcgcaacgaaagtgcacataatgaatacacagaaaaggataaa
tttgttgaaattataggtgccaaatatttagcttcaatggcagcgcctggagagccggtg
gggctgctagcagctcaatcaattggcgaaccgtcaactcagatgactttgaatactttc
cactttgctggtagaggtgatatgaacgttacattaggtatacctcgtttaagagaaatt
ttaatgacagcatcagcaaaattgaaaacacccagtatggatatacctttccttaataat
atcccagacataaataaaaaagccgaaagactaagacaaaaaatgaatagggtgacagtt
tccgatgtactcgaaaagatagatgtcgagtgcgaaatagtcacaaccccagataggcaa
ttgaaaaccacgatgcattttgtgtttctaccatattcccaatacaagacccagtatgct
ataaagccgccacaaataataaaacacatgcagaacaaattctttgatgagatgttcgcg
gtaatacgtaggcaggctaaaactacttgtggtgtattatgggcagcagaaaaagagaaa
aaacgtcgttctgcaggaagtgacgatgaagaagaagaggttattggtgcagagcctaag
gagcaagttaatgataatgttgacatcgacagttcagatgaagaaggacctaacgacgat
gatgacaatactgacgtaagaaatcgaaagaagcataccgaagaacaagaatacgaggat
ccagaatcaggggaggaagagaagtcagatgatgaaggcgaggacgaacaagacgcaaaa
gacgatgatgtgactgaagtgactcaagatgacgctaatagtaaaataatggctaacgtt
gttgaaaacatcaacaacgcaacaaactactcattcgacacgaagaatcacaaatggtgc
gaactgacagtgctttttcctatctcattcctggaggtcgatctatcgcaagcgcttcgt
gatgctgcaacgaggtccgttgtctatgaaattaaacatataaaacgagctataactaac
aaagagaaaaatgttctatatctaaaaacagaaggcattaatatagttcaaatgtttaaa
tataataacctccttgatttaaataaactgtacagcaatgatatacatgcaatagcaaac
acgtatggcatagaagcagctaataaagtaattataaaagaaatacagaatgtattcaat
gtttacggtatcacagtagatccgcggcatttatctctggtagcggattatatgacgtat
aatggagtatttgaacccatgagtcggaaaggaatggagtcatcaacatcgcctttacaa
caaatgtcgtttgaatcttctttaatattcttaaaggaagctgtattgaattcgaagaaa
gatttcataaggtccgcttcaagttgtctcatgttgggtcaaccctgtcgcatcggcact
ggagcgtttagcttgcagcatgtcagtaaagttatcagttaa
DBGET
integrated database retrieval system
