Methanothrix soehngenii: MCON_3186
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Entry
MCON_3186 CDS
T01468
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCON_3186 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcj03021
]
MCON_3186 (rpoE)
Enzymes [BR:
mcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCON_3186 (rpoE)
Transcription machinery [BR:
mcj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MCON_3186 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
RNA_pol_Rbc25
S1_2
Motif
Other DBs
NCBI-ProteinID:
AEB69476
UniProt:
F4BU99
LinkDB
All DBs
Position
complement(2682192..2682776)
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AA seq
194 aa
AA seq
DB search
MYKKMKLKGVARIEPDHLGDPLEAAVERALRDKYEGVVDKSLGTIVAVLGADDIGEGHIL
AGDGSIYYEVNFDTLVFKPEMQEIIEGEVVEIVKFGAFLSLGPFDGLLHVSQITNEYISY
DEKNARLVSKESNKSLGEGDRVRARVIAVSLNEKEPRESKIGLTMRQTGLGKLEWLDAAD
ETEKENASVQAEAK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagaagatgaagcttaagggtgtggccaggatagagccggatcatctgggagat
cccctcgaagcggcagtggaaagggcactgcgggataaatatgagggggttgtggacaag
tctctggggaccatcgtggccgtgctcggagcggatgatataggtgaaggccatatcctg
gcgggagacggatccatttactacgaggtcaacttcgataccctcgtcttcaagcctgag
atgcaggagatcattgagggcgaggtggtggagattgtgaagtttggcgcatttctctcc
ctggggccgttcgacggccttctgcacgtcagccagataaccaatgagtatatatcttat
gatgagaagaacgcgcgcctggtcagcaaagagtccaataaatccttaggagaaggagat
cgggttcgagccagagtaatagcggttagcctgaatgagaaggagcccagagagagcaag
atcggactgaccatgaggcagacgggcctggggaagctggaatggcttgatgctgcagac
gagacagagaaggagaatgcgagcgtccaggcagaggcaaaatga
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