Mastomys coucha (southern multimammate mouse): 116076770
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Entry
116076770 CDS
T07224
Symbol
Cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04010
MAPK signaling pathway
mcoc04020
Calcium signaling pathway
mcoc04713
Circadian entrainment
mcoc04925
Aldosterone synthesis and secretion
mcoc04927
Cortisol synthesis and secretion
mcoc04929
GnRH secretion
mcoc04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116076770 (Cacna1h)
04020 Calcium signaling pathway
116076770 (Cacna1h)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
116076770 (Cacna1h)
04925 Aldosterone synthesis and secretion
116076770 (Cacna1h)
04927 Cortisol synthesis and secretion
116076770 (Cacna1h)
09159 Environmental adaptation
04713 Circadian entrainment
116076770 (Cacna1h)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
116076770 (Cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116076770 (Cacna1h)
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116076770 (Cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116076770
NCBI-ProteinID:
XP_031206543
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MTEGTLAADEVRVPLGASPPAPAAPVRASPASPGALGREEQRGSGSGVLAPESPGTECGA
DLGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHISMLVIMLNCVTLGMF
RPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVM
AGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLDSAFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQ
KCSHIPSRRELRVPCTLGWEAYGQQQAEDGGAGRNACINWNQYYNVCRSGEFNPHNGAIN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIAT
QFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHIFRKVKRRSLRLYA
RWQSRWRKKVDPSSTLHGQGPRRRPRRAGRRTASVHHLVYHHHHHHHHHYHFSHSGPRRP
SPEPGAGDTRLVRACAPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVAHSIATAA
SLKLASGLGTMNYPTILPSGTVNSKGGTSSRPKGLRGAGAPGAAAHSPLSLGSPSPYEKI
QHVVGEQGLGRASSHLSGLSVPCPLPSPQAGTLTCELKSCPYCASALEDPEFEFSGSESG
DSDAHGVYEFTQDVRHGDCRDPVQQPHEVGTPGHGNERRRTPLQTASQPGGLSHLWASFS
GKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPDELTNALEISNIVFTSMFALEMLLK
LLACGPLGYIRNPYNIFDGIVVIISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRR
QLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ATRSDTDEDKTSTHLEEDFDKLRDLRATEMKMYSLAVTPNGHLEGRGSLPPPLITHTAAT
PMPTPKSSPHLDVAHALLDSRRSSSGSVDPQLGDQKSLASLRSSPCTPWGPNSAGSSRRS
SWNSLGRAPSLKRRSQCGERESLLSGEGKGSTDDDEGEDSRPSTGTHPGTSPGPRATPLR
RAESLDHRSTLDLCPPRPATLLPTKFHDCNGQMVALPSEFFLRIDSHKEDTAEFDDDIED
SCCFRLHKVLEPYAPQWCRSRESWALYLFPPQNRLRVSCQKVIAHKMFDHVVLVFIFLNC
ITIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMMVKVVALGLLWGEHAYLQSSWNVLD
GLLVLVSLVDIIVAMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLR
PIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGTDTRNITTKAECHAAHYRWVRRKYNFD
NLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLN
MFVGVVVENFHKCRQHQEAEEARRREEKRLRRLERRRRSKAAPKVEEAQRRPYYADYSHT
RRSIHSLCTSHYLDLFITFIICLNVITMSMEHYNQPKVHQVMASGMPQSLDEALKYCNYV
FTIVFVFEAALKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIR
IMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLE
CSEDNPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPAL
SPVYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAEMDAEIELEMAQGSTAQPPSA
AQESQGVQPDTPNLLVVRKVSVSRMLSLPNDSYMFRPVAPAAAPHSHPLQEVEMETYTGP
IASAHSPPLEPRTSFQVPSAASSPARVSDPLCALSPRGTPRSLSLSRILCRQEAMHTESL
EGQVDDTGEDSIPEPAENISISQAPLGALQSPPCSPRPASVRTRKHTFGQRCISSRPPAL
GGDDTEAADPADEEVSHITSSAHPWPATEPHSPEASPTASPAKGTVGSGRDPHRFCSVDA
QSFLDKPGRPDAQRWSSVELDNGDSHLESGEVRARASELEPALGARRKKKMSPPCISIEP
PTEDEGSSRPPAAEGGNTTLRRRTPSCEAALHRDCPESTEGPGTGGDPVAKGERWGQASC
RAEHLTVPNFAFEPLDMGGPGGDSFLDSDQSVTLEPRVSSLGAIVPLILETELSMPSGDP
PEKEQGLYLTVPQTPLRKPGSPPATPAPDDSGDEPV
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggcacgctggcagcggacgaggtccgggtgcccctgggcgcttcgcctccg
gcccctgcagcgccggtgagggcttccccggcgagccctggggcgctggggcgcgaggag
cagcgaggatccgggtcgggcgtgttggctcccgagagcccagggaccgagtgtggcgcg
gacctgggcgccgacgaggaacagcccgtcccatacccggctctggctgccacagtcttc
ttctgcctcgggcagaccacgcggccgcgcagctggtgcctccgactggtttgtaacccg
tggttcgagcacattagcatgctggtcatcatgctgaactgcgtgacactgggcatgttc
cggccctgtgaggatgttgagtgccgctcagaacgttgtagcatcttggaggccttcgat
gacttcatctttgccttcttcgctgtggagatggttatcaagatggtggctttggggctg
tttggccagaaatgctacctgggtgacacctggaacagactggacttcttcattgtcatg
gcgggcatgatggagtactctctggacggacacaacgtgagcctctctgccatccgaacg
gtgcgtgtgctgcggcccctccgcgccatcaaccgggtccccagcatgcggatcctggtc
accctgctgctggacacactacccatgcttgggaacgtccttctcctctgcttcttcgtc
ttcttcatcttcggcatcgttggggtccagctctgggctggcctgctgcggaaccgctgc
ttcctggacagcgccttcgtcaggaacaacaacctgaccttcttgcggccatactaccag
acagaggagggcgaggagaacccgttcatctgttcctcgcgccgcgacaatggcatgcag
aaatgctcacacatccctagccgccgtgagcttcgtgtgccgtgcacactcggctgggag
gcctatgggcagcaacaggctgaggatgggggtgctggtcgcaatgcctgtatcaactgg
aaccagtactacaacgtgtgccgctcaggggagttcaaccctcacaatggtgccatcaac
tttgacaacattggctatgcttggattgccatcttccaggtcatcacactggagggctgg
gtggacatcatgtactacgtcatggatgcccactcgttctacaacttcatctacttcatc
ctcctcatcattgtgggctccttcttcatgatcaacctgtgcctggtggtgatagctaca
caattctctgagacaaagcagagggaaaaccagctgatgcgtgaacagcgggcccgctat
ctgtccaatgacagcactctggccagcttctcagagcctggcagctgctatgaggaactg
ctcaagtatgtaggccacatcttccgaaaggttaaacgtcgcagcctgcgcctttatgcc
cgctggcagagccgctggcgtaagaaggtggatcccagcagcaccctgcacggccaaggc
cccaggcggaggccacggcgggcaggaaggcgtacagcttctgtgcaccatctggtctac
caccaccaccaccaccatcaccaccattaccacttcagccacagtggcccacgcaggcct
agcccagagccaggtgccggtgacaccaggttggtcagggcctgtgcaccaccctcccca
ccatccccaggccacgggccaccagactctgagtctgtgcatagtatctaccatgctgac
tgccatgtggaggggccacaggaaagagcccgcgtagcgcactccatagccactgctgcc
agtctcaagctggcctcgggcttgggcaccatgaactaccccaccatcctgccttcagga
acagtcaacagcaaaggtggtaccagctcacgacccaaggggctgcggggtgctggcgcc
ccaggggctgcagcacacagccctctgagcctgggaagccccagcccctatgagaagatc
cagcatgtggttggagaacaaggactaggccgagcctctagccacctgtcaggcctgagt
gtgccttgccccctgccgagcccccaggctggcacactaacctgtgagctgaagagctgc
ccatattgtgccagcgccctggaggaccctgagtttgagttcagtggctcagagagcggg
gactcagatgcccacggagtctatgagtttacacaagatgtgcggcatggggattgccgg
gaccctgtgcagcaaccccatgaggtgggcacaccaggccatggcaatgagcggcgacgc
acaccactgcagacagcctcacagccaggagggctaagccatctctgggcttcctttagt
ggcaagctgcgtcgcattgtagacagcaaatacttcaaccgaggcatcatggcggccatc
ctcgtcaatactctgagcatgggcgttgagtatcatgagcagcctgatgagctgactaac
gcattggagataagcaacatcgtgttcaccagcatgttcgccttggagatgctactcaag
ttgctggcctgcggcccgctgggatacatccggaacccctacaacatctttgatggcatt
gttgtcatcataagcgtctgggagatcgtggggcaggcagatggtggcctgtctgtgctc
cgtacattccggctgctgcgggtgctgaagctggtgcgctttctgccagccctgcggcgg
cagctggtggtgctcatgaggaccatggacaacgtggccaccttctgcatgctgctcatg
ctcttcatcttcatcttcagcatcctgggcatgcacctgtttggctgtaagttcagcctg
aagacagactctggagacaccgtccctgacaggaagaacttcgactccctactgtgggcc
atcgtcactgtgtttcagatcttaacgcaggaagactggaatgtggttctttacaacggc
atggcttccacctcgtcctgggctgccctttactttgtggccctcatgacctttgggaac
tacgtgctcttcaacctgctggtagccatcctggtggaaggcttccaggcagagggcgat
gctaccagatctgacactgatgaggataagacatctacccacctggaggaagatttcgat
aagctcagagatcttcgagccacagagatgaagatgtactcactggctgtgacccctaac
gggcacctagagggccgaggcagtctgccgccacctctcatcacgcacacagcagctacg
cctatgcctactcccaagagctccccgcacctggacgtggcccatgctctcctggactca
cgtcgcagcagcagcggctctgtggacccccaacttggggaccagaagtctctggccagc
ctccgcagctccccttgcaccccgtggggccccaacagcgctgggagcagcaggcgctcc
agttggaacagcctgggccgcgcacccagcctcaaacgccgcagccagtgtggggagcgc
gagtccctgctctctggcgaagggaagggcagcacagatgatgacgagggggaggacagc
agaccaagcacaggaacccacccaggaacctcacctgggccccgagccacaccacttcgg
cgcgctgaatcattggaccaccgcagcacgctggacctgtgtcccccacggcctgccacc
ctcctacccaccaaattccatgactgcaatgggcagatggtggccctgcccagcgagttc
ttcctgcgcatcgacagccacaaggaggacacagcggagtttgatgatgacatagaggat
agctgctgcttccgcctgcacaaagtgctggaaccctatgcgccccagtggtgccgcagc
cgggagtcctgggccctgtatctcttcccacctcagaacaggctccgcgtctcctgccag
aaagtcattgcacacaagatgtttgaccacgtggttcttgtcttcatcttcctcaactgt
atcaccattgccctggagaggccagacattgacccaggcagcactgagcgggccttcctc
agcgtctccaactacatcttcacagccatcttcgtggtggagatgatggtgaaggtggta
gccctcggactgctgtggggtgagcatgcctacctgcagagcagctggaatgtgctagac
gggctgcttgtcctggtgtccctggttgacatcatcgtggccatggcctccgctggtggt
gccaagatcctaggcgtcttgcgtgtgctgcgcctgctgcggaccctgaggcctctgagg
gtcatcagccgagctccgggcctcaagctggttgtagagactctgatatcatcgctcagg
cccattgggaacatcgtcctcatctgctgcgccttcttcattatctttggcatcctcggg
gtgcagcttttcaagggcaaattctactactgcgacgggacagacaccaggaatatcact
accaaggccgagtgccatgctgcccactaccgatgggtgaggcgcaagtacaactttgac
aaccttggtcaggcgctgatgtctctgttcgtgctgtcgtcgaaggatggctgggtaaac
atcatgtacgacgggctggatgccgtgggcatcgaccagcagcccgtgcagaaccacaac
ccttggatgctgctctacttcatctccttcctgctcatcgtcagcttctttgtgctcaac
atgtttgtgggtgtggtggtggagaacttccacaagtgccggcagcaccaggaggctgag
gaggcgcggcggcgcgaggaaaaacggctgcggcgcctggagaggaggcgcaggagtaag
gcggcccccaaggtggaggaggctcagcgccggccctactatgccgactattcacacacg
cgccgctccatccactcgctgtgcaccagccactacctggacctcttcatcactttcatc
atctgcctcaatgtcatcaccatgtccatggagcactacaaccagcctaaggttcatcag
gtgatggcttcaggcatgccacagtcactggacgaagccctcaagtactgcaactacgtc
tttaccatcgtcttcgtcttcgaggccgcactgaagctggtggcctttgggttccgaagg
ttcttcaaggacaggtggaaccagctggacttggccattgtcctcctgtccatcatgggc
attgcgctggaggagattgagatgaacgctgcccttcccatcaaccccaccatcatccgc
atcatgcgtgtgcttcgtatcgcccgtgtgctgaagctactgaagatggccacaggcatg
cgcgccctgctggatactgtggttcaagctctgcctcaggtagggaaccttggtcttctt
ttcatgctcctgttttttatctatgctgccctgggagtggagctgtttgggaggctagaa
tgcagcgaggataatccctgtgagggcctgagcaggcacgctaccttcaccaactttggc
atggccttcctcacgttgttccgagtgtccactggggacaactggaacgggatcatgaag
gacactctccgggagtgcacccgagaggacaagcactgcctcagctacctgcccgcgctc
tcgcctgtctactttgtcaccttcgtgctggttgcccagttcgtgctggtcaacgtggtg
gtggccgtgctcatgaagcacctggaggagagcaacaaggaggcccgcgaggacgcggag
atggatgccgagattgagctggagatggcgcaagggtccacagcccagcccccatctgca
gcacaggaaagccaaggtgtccagccagacaccccgaatctcctggtcgtgcgcaaagta
tctgtgtccaggatgctctcgctgcccaatgacagctacatgttccggccggtggctcct
gcggctgccccacattcccacccactgcaggaagtggagatggagacctacacaggcccc
atcgcctctgctcactcgccacccctggagccccgtacctccttccaggtcccatcagct
gcatcctccccagccagggtcagtgaccccctttgtgccctttcaccccggggtacaccc
cgctctctgagcctctcgcggatactctgcagacaggaggccatgcacaccgagtccctg
gaagggcaggtagatgacactggagaagacagcatcccagagcctgctgaaaatatttcc
ataagccaggcacctctgggtgccctgcagtcccctccgtgctccccacggcctgccagc
gtccgtacccgcaagcacacttttgggcagcgctgcatctccagccgtcctcctgccctg
ggaggagatgacactgaagctgcagacccggcagatgaggaggtcagccacatcaccagc
tcagcccacccctggccggctactgagccccacagcccggaggcctccccaacagcctct
cctgcgaaaggcacagtgggcagtgggcgggacccacacaggttctgcagtgtagatgct
cagagcttcctggacaaaccaggtcgaccagatgcacagcggtggtcctcagtggaactg
gataatggagatagccacctagagtccggggaagtgagggcccgggcctcagagcttgaa
ccggctcttggggcacggaggaagaagaagatgagccctccctgcatctctattgaacct
cccactgaggatgagggctcttcccgcccccctgcagccgaaggaggcaacactaccctg
aggcgccgaaccccgtcctgtgaggctgccctccacagggactgcccagaatctacagag
ggcccaggcactggaggggaccctgtagccaagggtgagcgctggggccaggcctcttgc
cgggcagagcatctgactgtcccgaactttgcctttgagcctttggacatgggcggacct
ggcggagactctttcttggacagtgaccaaagtgtgaccctggaacccagagtttcctct
ttgggggctatagtgcctctaatcctagaaactgaactttctatgccctctggtgacccc
ccagagaaggagcaaggactatacctcactgtgccccagacccccttgaggaaaccaggg
tctcccccagccactcctgctccagatgacagtggagatgagcctgtgtag
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integrated database retrieval system