Mastomys coucha (southern multimammate mouse): 116084627
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Entry
116084627 CDS
T07224
Symbol
Polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03020
RNA polymerase
mcoc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116084627 (Polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116084627 (Polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116084627 (Polr3a)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116084627 (Polr3a)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116084627 (Polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
116084627
NCBI-ProteinID:
XP_031217576
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKQQFLDFLKRPGLTYLQKRGLKKKISDKCRKKSTCHYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYSGKGEDLCTNDSYVTIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCQSEPALSKNDLTVTTEAIMKKNEFLC
CQDSFLQEIKTFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKFKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPKPPRRPLIFD
THEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgcgaaacagatgtggctaagaaaataagccatatctgtttt
ggaatgaagtcccctgaggagatgcgccagcaggcacatatacaggttgtcagtaagaac
ctgtacagccaagacaacaaccatgcccccttgctgtatggagtgcttgaccatagaatg
ggtacaagtgaaaaggatcgtccttgtgagacctgtgggaagaacttggcggactgtcta
ggccactatggatacattgatctggagctgccatgctttcacgtcgggtacttcagagct
gtcattggcatcttacagatgatctgcaaaacctgctgccacattatgctgtcccaggaa
gagaagcagcagtttctagatttcctgaagagacctggcctaacctacctgcagaagcga
ggcctgaagaagaagatctcagataagtgccggaagaaaagcacttgtcactactgtggc
gcctttaatggtactgtaaagaaatgtggtttactgaagataattcatgaaaaatacaag
acaaacaaaaaagttgtggatcccattgtatcaaacttcctgcagtcctttgagacagcc
attgagcataacaaagaggttgaacccctgctgggaagagcccaggagaacttgaatccc
ttagtggttctgaacttgtttaagcgcatccccgctgaagatgtcccgttacttcttatg
aacccagaagctggaaagccctctgatttgattctcacccgacttttggtacctcccctg
tgtatcagaccttctgtcgtgagtgatttgaagtctggaaccaatgaagatgatctaaca
atgaaactgacagagatcattttcctaaatgatgtcattaaaaagcaccggatctcagga
gccaagacacagatgatcatggaggactgggatttcctgcagctgcagtgtgccctctac
atcaacagtgagctctctgggatccctctcaacatggcacctaagaagtggactcgaggc
tttgtgcagcgcctgaaggggaaacagggtcgatttcgaggtaatctatcagggaagagg
gtggatttttctggccgaacagtcatctcacctgaccccaaccttcggattgatgaagta
gccgtgccagttcatgtggccaaaattctaacttttcctgagaaggtgaacaaagcaaac
atcaattttttgaggaaactggttcgaaatggcccggatgttcacccaggagccaatttc
atccaacaaagacacatgcagatgaaaaggttcctgaagtacggaaatcgggaaaagatg
gctcaggagctcaaattcggcgacattgtagagagacacctgatagatggagatgtggta
ttgttcaaccggcagccctcactgcacaaactgagcatcatggcccatctggccagggtc
aagccccaccggaccttcaggttcaatgaatgtgtctgcaccccctacaatgcagacttt
gatggggatgaaatgaaccttcatcttccccagacagaggaagccaaagcagaggccctt
gttcttatggggaccaaagccaaccttgtaactccacgaaatggggagccactcattgct
gccattcaggacttcttaacaggtgcttacctcctcaccctcaaggacactttctttgat
cgagccaaggcttgccagatcatcgcttcaatactggttggcaaagatgaaaaaattaaa
gtgcgcctcccaccacctacaatactaaagcctgtcaccctgtggaccggaaagcagatc
ttcagtgtcatcctcagacctagtgatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactctggcaagggggaagacctctgtaccaacgactcctatgtcaccatc
cagaacagcgagttgatgtgcggcagcatggacaaagggaccctggggtcagggtccaag
aacaacatcttctacatcctgctacgagactggggtcagaatgaggctgccgacgccatg
tctcggcttgccaggctggctcctgtctacctgtctaaccgaggcttctccattgggatc
ggtgatgtcacacctggccagggactgctgaaagccaagtatgagctactaaatgctggc
tacaaaaaatgtgacgaatacattgaagccctgaacacaggcaagctgcagcagcagcca
ggctgcaccgctgaggagacgctcgaggctctgatcctgaaggagctgtctgtgatccgg
gaccatgctggcagtgcctgcctccgagagctggacaagagcaacagccctctcaccatg
gccctgtgtggttccaaaggttccttcattaacatatcacagatgattgcctgtgtggga
cagcaagccatcagtggctcccgggttccagatggctttgagaacagatctttgcctcac
tttgagaagcattcaaagctccctgctgccaaaggctttgtggccaatagcttttactct
ggcttaacgcctactgagtttttcttccacacgatggctggtcgggagggcctggtggac
acagctgtgaagactgctgaaacaggatacatgcagagaagactggtcaaatccctggaa
gacctctgctcccagtacgatctgacagtgcggagttccaccggtgacatcatccagttc
atctatggaggagatggcttagatcccgccgccatggagggcaaagatgagccgctggag
tttaaaagggttctggacaacatcagggcagtgtatccttgtcagagtgaacctgctctc
agtaagaacgacctcaccgtgaccactgaggccatcatgaagaagaatgagttcctatgc
tgccaagacagcttcctgcaggaaataaaaacattcattaaaggggtgtctgagaagatt
aagaaaaccagagataaatacgggatcaacgataacggcacaacagagcctcgtgtgctg
taccagttggaccgtattacccctacccaaatagagaagtttctggagacctgtagggat
aagtacatgagagcacagatggaaccaggctccgcagtgggtgcactctgtgcacagagc
attggtgagccaggcacccagatgaccctgaagaccttccactttgcaggggtagcctcc
atgaacatcaccctgggtgtgcctcggatcaaagagatcatcaacgcttcgaaggccatc
agcactccaattatcacagcacagctagacaaggatgatgatgcagattacgcacgcctg
gtgaagggcagaattgagaaaactctcctgggggagatctcagagtatattgaagaagta
tttcttcctgatgactgctttattcttgtcaagctctctctggaacggatccgacttctg
agactggaggtcaatgctgagacagtgcggtactccatctgcacatccaagctccgagtg
aagcctggtgatgtggctgttcatggggaggctgtggtgtgtgtcacccccagggaaaac
agcaagagctccatgtattatgtgctgcagtttctgaaagaggacctacccaaggtggtg
gtacaaggtatcccagaggtgtcaagagctgtcatccatatcgatgagcagagtgggaag
gagaagttcaagcttctagtagaaggtgacaacctgcgggcagtcatggccacccacggt
gtgaaaggcacccgaaccacttctaataacacctatgaggtggaaaaaaccctgggcatt
gaggctgcccggacaactatcatcaacgagatccagtacacaatggtcaaccatggcatg
agcatcgacaggaggcacgtgatgctgctctctgacctgatgacctacaagggtgaagtc
ctgggtataaccaggtttggcctggccaagatgaaggagagtgtgttgatgctggcatcc
tttgagaagacagctgaccatctctttgatgctgcctactttgggcagaaagactccgta
tgcggtgtgtctgagtgcatcatcatgggaattccaatgaacatcggaactggtctcttc
aagctgttacacaaagccaatagggacccaaaaccacccaggaggcccctgatatttgac
acacatgaattccacatccctcttgtcacatag
DBGET
integrated database retrieval system
