Mastomys coucha (southern multimammate mouse): 116085105
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Entry
116085105 CDS
T07224
Symbol
Parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03410
Base excision repair
mcoc04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116085105 (Parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116085105 (Parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoc03032
]
116085105 (Parp4)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116085105 (Parp4)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116085105 (Parp4)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
116085105 (Parp4)
DNA replication proteins [BR:
mcoc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116085105 (Parp4)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116085105 (Parp4)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116085105 (Parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
VIT
VWA_3
VIT_2
VWA
BRCT
BRCT_2
VWA_2
PTCB-BRCT
PARP_reg
Motif
Other DBs
NCBI-GeneID:
116085105
NCBI-ProteinID:
XP_031218414
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MTLGIFANCIFCLKVKYLPRQQKKKLQTDIKENGGKFSFLLNPQCTHVIVDSADVLSRCH
LNSIQKNDVRIANPAFIQDSVRQRRLLDVSNYDPMSPATTAPPAERSSSVLEVQSEDVPL
DNTPEEENTDTTEVSAENVEIPPFLQDFEVVKYNILEKVGVDQGPETVVVELQSSQDPGS
CPFVIAAHFLLADGKTRRESTGKQTSKGAIEYYEGYVEDLKRQGFLLQEHFTADTTQLAS
EKLQALLLEEVISSGTLSQEVSNLLEVIWTEALGHLEHTLLKPVNSVSLNDVSKAEGILL
LVKTALKNGDSPEQLRKTMAEFYRLLPHRHPASEEVNLRLLAQKEDLCQLVRDMVNVCET
NLSKPNPPSLAKYRALRCKIEHVEQNTEEFSRVRKEVLQNNRSECPVDILQVFRVGRVNE
ATEFLSRLGNVRPLFHGSPVRNILGILSRGLLLPKVAEDRGVQRTDVGNLGSGIYFSDSL
STSIKYAHAGKTDGSRLLVVCDVALGKCVDLFKKDFSLTEAPPGYDSVHGVSETASVPTD
FQDDEFVVYKTNQVKMKYIVKFCIPGDQIKEFHPHENTELEEHRTELSNVPEVEDFQLPD
IKPLTNVKAGLQDEAANSVPLDSVHIKGRIIDFVAQVIVFQTYTNQSQVPIEAKYIFPLD
DKAAVCGFEAFINGKHIVGEIKEKEEARQKYQEAISHGHGAYLMDQDAPDVFTVSVGNLP
PRAKVLIKITYITELSIQGPVAIFFIPATVAPWQQDKALNENLQDTVETICIKEIGAEQS
FSLAMSIEMPYMIEFISSDTHELRQKSTDCKAVISTMEGSSLDSTGFSLHIALRDAYLPR
MWVEKHPEKESEACMLVFQPELADILPDLCEKNEVIICLDCSSSMEGVTFTQAKQIALYA
LSLLGEEQKVNIMQFGTGYKELFSYPKCITDNKMATEFIMSAAPSMGNTDFWKILRYLSF
LYPSEGFRNILLISDGHLQSESLTLQLVKRNTQHTRVFTCAVGSTANRHILRTLSQYGAG
VFEYFNSKSKHSWKKQIEAQMTRIRSPSCHSVSVKWQQLSRDTPEPLQAPAWLPSLFHND
RLLVYGFIPHCTQATLRAFIQEKEFCTMVSTTELQKTTGTMIHKLAARALIRDYEDGILH
DNETNHEMKKNIMKSLIIELSKENSLITQFTSFVAVEKRDVNEIPFANVPNISELVAKED
VDFLPYVSWQEKQPETFTSQAEIESSRQKQDEVTDGSGVLQFSPMQPFSISSEGNEKPSL
LSTVKKRKIKTIKTCNLDDFEDSQDMSAAPQSPNFLLPLDNCPQPKDVEQLLDVNWMKPK
EKRGIRSQLMAKTLPNVPVSLDSPAPADAAGFSFLSARSSRSARHLGGTHPPPPLPPPLP
PRLRSGTHPPPLPPTLFGGTHPPPTLFGGTHPPPPLPGGTPLPTPPSLFGGTHLPPPPPP
PPPPPAGTQFSLSPIGLTPPKMGLFKLSQSSKLAIYDSEPPPLGSRGMTFNGTGFSGMGF
GGGTTFSGSFASSKDFDPGKFSQDPNNISFSRKAPELGILHGSPFCSPPKPPSASPLVTS
VLSSGVPQSSSFFHLQSASEPRSPNYRMSEISRKSLELALPLDYSSRAVSSACVLEEARA
ASLAPCSFEMETYDDVTFACDDVDEKFLTSIENSLEEESVICEEDEESVICEEDEESVIC
EEDRKSPVSWASLFALQTEDGFWKLTPELGLILKLNVNALLNSLEEKGIRSLGTKGRERL
LDLIATLLVLQFLYTELEQEGTVTKSLIKMDDAFIFRNIPWAFENIKKAREWARRTEGQY
PSICQRLELGIDWESATKQLLGIQPQANTSLHRILHYSQG
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgactttgggaatctttgcaaattgtatattctgcttgaaagtcaagtacttacctcgt
cagcagaagaaaaagctgcaaactgacattaaggaaaatggcggaaagttttccttttta
ttaaaccctcagtgcacacacgtcatcgtagacagtgctgacgtcctgagtcggtgccat
ctgaactccatccaaaagaatgatgtccggattgccaacccagccttcatacaggactct
gtcagacagaggagactcctggatgtgagcaattatgatcctatgtcgccggctacaaca
gcacctccagctgaaaggagcagttctgttctagaagtacaatcagaagatgtgcctttg
gacaacaccccagaagaggagaacaccgacaccactgaggtttctgcagagaatgttgaa
attcctccctttcttcaagactttgaggttgtgaaatataacatcttggaaaaagtggga
gtggaccaaggcccggagactgtggtggtggagctgcagagctcccaggacccagggagc
tgcccctttgtgatagcagcacacttcctcctggctgatggaaagactagaagagagagt
actgggaagcaaacctccaaaggtgcaattgaatattatgaaggttatgtggaagacctg
aagagacaaggatttctgctccaagaacactttacagccgatacaacacagttagcgtct
gagaaactgcaggcgttgcttttggaggaggtcataagttctggaaccctgagccaggag
gtgagcaatttgctggaggtgatctggacagaagctctgggccacctggagcacacactc
ctcaagccggtgaacagcgtgagcctgaatgatgtgagtaaagcggaggggattctcctc
ctggtaaagacagcactgaagaatggagactccccggaacaactgcggaagacaatggcc
gagttctacaggctgctgcctcacagacatccagcatcagaagaagttaacctgaggctg
ttagctcagaaagaggacctttgtcagctggtaagagacatggtgaatgtttgtgaaact
aatttatccaaacccaacccaccatctcttgccaaataccgagctttgagatgcaaaatc
gaacatgttgaacagaatactgaggaattttccagggttagaaaagaagtattgcagaat
aatcgaagcgaatgcccagtagatatcttgcaggtatttagagttggcagagtgaatgaa
gctacggagtttttgagcagactgggcaatgtgcgacccttgttccatgggtctcctgtg
cggaacattcttggaatcttgtcccgaggactgctcttgcctaaggtagctgaagaccgc
ggtgtgcaaagaacagatgttggcaatctgggaagcgggatctacttcagtgactcactc
agtacaagcattaagtatgcacatgcaggaaagacagatggctccagactcctggtcgtc
tgcgatgttgccctgggaaagtgtgtggacttattcaagaaggacttttctttaactgag
gcaccaccgggctatgacagtgtgcatggagtttcagaaacagcctctgtccccacagac
tttcaggatgatgaatttgttgtatataaaaccaatcaagttaaaatgaaatacattgtt
aaattttgcattcctggagatcaaataaaggaattccatcctcatgaaaatactgaatta
gaggagcatagaactgagctttcaaatgttccagaggttgaagatttccagttaccagac
atcaagcccctcacaaacgttaaagctggccttcaagatgaagctgcgaattctgtccct
cttgacagtgttcacatcaagggaagaataatagactttgtagcccaggtcattgttttt
cagacatacacaaatcaaagccaagtacctattgaggcaaaatatatcttcccattggat
gacaaggcagccgtgtgtggcttcgaggcatttatcaatgggaagcacattgtgggagag
ataaaggagaaggaagaggcccgacagaaataccaagaggctatcagccacggtcatggt
gcttacttgatggaccaggatgctccggatgttttcactgtaagtgttggaaacttaccc
cctcgggctaaagttcttatcaaaatcacttacatcacggaactcagcatccaaggtcct
gtggccatcttcttcatccctgccactgtagcaccctggcaacaggacaaggcattgaat
gagaaccttcaggatacagtagagacgatttgcataaaggaaattggagcagagcaaagc
ttctccctggctatgtccatcgagatgccgtacatgattgaattcatttccagtgacaca
cacgagctgagacaaaagagcacagactgtaaagctgtaattagcaccatggaaggcagc
tccctggacagcactggattttctctccacattgctttgcgtgatgcatatcttccaagg
atgtgggtcgaaaaacatccagaaaaagaaagcgaggcttgcatgcttgtctttcagccg
gagcttgcagacatcctccctgacctctgtgaaaagaatgaagtgattatttgtcttgac
tgttccagttccatggagggtgtgacatttacgcaagccaagcagattgccctgtatgct
ctgtctttgttgggtgaggagcaaaaagtcaacattatgcagtttggcacagggtacaag
gaactattttcataccctaagtgcatcacggacaataaaatggccacagagttcattatg
tctgcagcaccttccatggggaacacagacttctggaaaattctccgctatttaagtttc
ctgtacccttcagaggggttcaggaacattctcctcatatctgatgggcacctccagagt
gagagtctgacactgcagcttgtgaaaagaaatacccagcacaccagagtgttcacctgt
gctgttggttctacagcaaatcgtcacatcttaaggaccttgtctcagtacggtgctgga
gtgtttgaatattttaactcaaaatctaagcacagttggaaaaaacagatagaagcccaa
atgaccaggatacgttccccaagttgccactctgtctctgtcaaatggcagcagcttagc
agagatacccctgagcccctgcaggccccggcgtggctgccctccttgtttcacaatgat
cggctcctggtctacggattcattcctcattgtacacaagcaactctgcgtgcattcatc
caagagaaagaattttgcacaatggtgtcaactacagaacttcagaagacaactgggact
atgattcacaagctggcagcacgggcgctaatcagagactatgaagacggcattctccac
gacaatgaaaccaaccacgagatgaagaaaaacatcatgaaatccctgattattgaactc
agtaaagaaaattctcttattacacagtttacaagctttgtggcagttgagaaaagggat
gtcaatgagattccttttgctaatgttccaaatatttcggaacttgttgccaaagaagat
gtagactttctaccctacgtgagttggcaggaaaagcagccagagacctttacctcacag
gcagagattgagtcttcaagacaaaagcaagatgaagtcactgatggtagtggagtgcta
cagttctctcctatgcagcccttctccatctcctctgaagggaatgagaaaccatcactg
ctatccactgttaaaaaacgtaaaataaagactataaagacgtgtaatctagacgatttt
gaagattctcaagacatgtccgccgcaccacagtctcctaacttcctcctgcctctcgat
aactgcccacaaccaaaggatgtggagcagctgctggatgtgaactggatgaagccaaag
gaaaaaagaggaattagaagccagctcatggcaaagacgcttccaaatgtgcctgtttcc
ctggattctcctgctcctgcagatgcagctgggttttctttcctctctgcccgcagctct
aggtctgcccgtcaccttggtggtacccaccctcctccccctcttcctccccctcttcct
ccccgtctccgtagtggtacccaccctcctcctctccctcccactctctttggtggtacc
caccctcctcccactctctttggtggtacccaccctcctccccctctccctggtggcacc
cctcttcctacccctccctctctctttggtggtacccatcttcctccccctcctcctccc
cctccccctccccctgctggcacccaattttctctttctcctataggactcaccccacct
aagatgggtctgtttaagctcagccaaagcagtaagcttgccatctatgactcggagccg
cctcccttgggctctaggggtatgacctttaatggcacaggctttagtggtatgggtttt
gggggtggtaccactttctcaggtagcttcgcaagttcaaaggattttgatccaggtaaa
ttttcccaagacccaaacaacatcagcttctctcgcaaagcccctgaactgggtattctt
cacgggtcacctttttgcagtcctcctaagccaccttctgcctctcctcttgtcaccagt
gtactaagctctggggttcctcagagctcttctttttttcatttgcaaagtgcctcagaa
cctcggagccctaattacagaatgtcagagatcagcaggaagtcacttgagttagctctc
ccattagattattcttccagagctgtgtcatcagcctgcgtcctagaagaggccagggct
gcctcactggctccatgttcttttgaaatggaaacatatgatgacgtaacatttgcatgc
gacgatgttgatgagaagtttttaacaagtattgagaattcgttagaagaggaaagtgtc
atctgtgaagaagatgaggaaagtgtcatctgtgaagaagatgaggaaagtgtcatctgt
gaagaagaccggaagagccctgtgtcgtgggcgtcactctttgctctgcagactgaggat
ggtttttggaaactgacaccagaactaggacttatactaaaacttaatgtaaatgcttta
ctcaattctcttgaagaaaagggcattcgatctctaggtacaaaagggagagagcgtctc
ctggacctgattgccactttgctggtactgcagtttctttatactgagttggaacaagaa
ggaacggttaccaaatctctgataaagatggatgacgccttcatttttaggaatattcca
tgggcttttgagaacataaagaaagcaagagaatgggccagaaggacagaaggacagtat
ccatctatctgccaacggcttgagctgggtatagactgggagtcagccacaaagcaacta
ctgggaattcagccccaagccaacacttctcttcaccgaattctacactacagtcaaggc
tga
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integrated database retrieval system
