Mastomys coucha (southern multimammate mouse): 116086167
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Entry
116086167 CDS
T07224
Symbol
Hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00780
Biotin metabolism
mcoc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
116086167 (Hlcs)
Enzymes [BR:
mcoc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
116086167 (Hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
116086167 (Hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
116086167 (Hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
116086167 (Hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_N
Motif
Other DBs
NCBI-GeneID:
116086167
NCBI-ProteinID:
XP_031220339
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MEDRLQMDNGLIAQKIVSVHLKEPALKELGKASDKQVQAPVLGPEASSEAQPAQGAMENA
GQGDWKAGDEGPSPWKRGCAPGSEPAGDGDPGPSSVELCQLHLSSCHECLELENSTIESV
RCASAESIPDLPCVRSSSSSSSSSSMEGASGKLCSEWKARRVNVSGKAPNILLYVGSGSE
EALGRLQQVRSVLTDCVDTDSYTLYHLLEDSALRDPWPDNCLLLVIASRDPIPKDIYHKF
MTYLSQGGKVLGLSSPFTFGGFRVTRRDVLRNTAQNLVFSKADGSEVRLSVLSSGYVYEE
GPSPGRLQGYLENEDKDTMVVHVPFGTCGGEAILCQVYLELPPSASLVQTADDFNVLKSS
NMRRHEVLKEILTALGLSCDTPQVPTLTPLYLLLAAEEIQDPFMQWLRRHVDPEGIIKSS
KLSLQFVSSYTSEAEITPSSIPVVTDPAFSSEHFNLETYRQNLQTTRLGKVILFAEVTST
TMSLLDGLMFEMPQEMGLIAIAVRQTQGKGRGPNAWLSPVGCALSTLLLSVPLRSQLGQR
IPFVQHLMSLAVVEAVRSIPEYEDINLRVKWPNDIYYSDLMKIGGVLVNSTLMGETFYIL
VGCGFNVTNSNPTICINDLIEEYNKQHKASLKPLRADYLIARAVTVLERLIDRFQDQGPD
GILPLYYKYWVHSGQQVRLGSSEGPQVSIVGLDDSGFLQVHQDDGGVVTVHPDGNSFDML
RNLIVPKRQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggctccagatggataacggcctgatagcacagaagatcgtgtcagtccac
ttaaaggagcctgctctgaaggaacttggcaaggcctccgacaagcaagtgcaggcccca
gtcctgggccctgaagcttcctctgaggcccagcctgcccaaggtgccatggagaatgct
ggccagggtgactggaaggctggtgatgaaggcccttccccatggaagaggggctgtgcc
cctggaagtgagcctgctggagatggagatccagggccgagctctgtggagctctgtcag
ctccacctgtccagctgccacgaatgtttggagcttgagaatagcaccattgagtcagtg
aggtgtgcgtctgcggagagcattccagaccttccctgtgttcgcagcagcagcagcagc
agcagcagcagcagcatggagggtgcttcgggcaaactctgttctgagtggaaagcgagg
agagtcaacgtttctggaaaggcgcccaatatcctgctgtatgtgggctctggttccgag
gaagccctgggccggctccagcaggtgcggtctgtcctgaccgactgtgtggacacggac
agctacactctctaccacctgctggaagacagcgctctgagggacccgtggcccgacaac
tgcctcctgttagttatcgccagcagggatcctatccccaaagacatataccacaagttc
atgacctatctttctcagggagggaaggtgctgggcctgtcttcccccttcacgttcggt
ggctttcgggtgaccaggagagacgtgctgcggaacacagcccagaacttggttttctct
aaggctgatgggagtgaggttcggctcagtgttctgagcagcggctacgtttatgaggaa
ggcccgagcccaggcaggctccagggctacctggagaatgaagacaaggatacgatggtt
gtgcatgtgccttttggaacctgcggaggggaagccattctctgccaggtgtatctggag
ctccctccaagcgcttccctggtgcaaaccgcagacgactttaatgtgctcaaatccagc
aacatgagaagacatgaggtccttaaggagatccttactgcccttggtctgagctgtgac
acaccacaggttcccaccttaactccattgtacttactgctggctgctgaggaaatccag
gatccgtttatgcagtggctcaggagacacgtggatcctgaaggaatcataaaatccagc
aagctctcccttcagtttgtttcctcctacacgtctgaagctgagatcaccccgtcttcc
atccccgtagtcaccgacccggccttctcatcagagcactttaacctcgagacctatcga
cagaatctgcagaccacgcgccttgggaaagtaattctgtttgcagaagtgacctccaca
accatgagtctcctggatgggttgatgtttgagatgccgcaggaaatgggcttaatcgcc
atcgcagtccggcagacccagggcaaaggaaggggcccaaatgcctggctgagccctgtg
ggatgtgccctttccactctgctgctctccgtccccctgaggtcacagctgggacagagg
attccatttgtccagcatttgatgtccctggctgtggtggaggcggttcggtctatccca
gagtatgaggatatcaacttgcgagtgaagtggcccaacgatatttattacagcgatctc
atgaagatcggtggagttctggttaattcaacacttatgggagaaacattttatatcctc
gttggctgtggattcaatgtgacgaacagtaatcctaccatatgtatcaacgacctcatc
gaagaatacaataagcagcacaaggccagcctgaagcccttgcgagccgactatctgatt
gctagggccgtaacggtgctggagagactaatcgacaggtttcaggaccaagggcccgac
ggcattcttcctctctattataaatactgggtgcatagtggtcagcaagtccgcctgggc
agcagcgaggggccacaggtgtctattgtgggcctcgatgattccgggttcctgcaggtt
caccaggatgacggtggggttgtgacggtgcatccagatggcaactccttcgacatgctg
agaaacctcatcgtgcccaagcgacaataa
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