Mastomys coucha (southern multimammate mouse): 116089721
Help
Entry
116089721 CDS
T07224
Symbol
Trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcoc03016
]
116089721 (Trdmt1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
116089721 (Trdmt1)
Transfer RNA biogenesis [BR:
mcoc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116089721 (Trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
116089721
NCBI-ProteinID:
XP_031224907
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MEPLRVLELYSGIGGMHHALRESRIPAHVVAAVDVNTVANEVYKHNFPHTHLLAKTIEGI
SLEEFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTRSFLYILDILPRLQKLPNYILLEN
VKGFEVSSTRELLIQTIEACDFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPG
QILMEFPKIVTVEPQKYAVVDKSKLRAKRTGPRICTESSSTQCSGKDAILFKLETAEEMD
RKHQQDSDVSVQMLKDFLEDGDMDQYLLAPRSLLRYALLLDIVRPTSRRSMCFTKGYGSY
IEGTGSVLQTAEDVQIENIYKSLTDLPPEEKIAKLSMLKLRYFTPKEIANLHGFPPEFGF
PEKTTVKQRYRLLGNSLNVHVVAELLTVLCEGWGSASEGSQCASNSRQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaacctctgcgtgtcctggagctgtacagtggcattggtggcatgcaccacgcgctg
cgagaaagtcgtatccctgcacatgtggtggctgctgttgatgtgaacaccgttgctaat
gaagtatacaagcataattttcctcatacacacttactggcaaaaacaattgaaggtatt
tcactggaagagtttgacaagctatctttcaatatgattttaatgagccctccatgtcag
ccattcacgagaattggcctacagggggatatgactgatccaaggacacgtagcttcctg
tacattctagatattctcccaagactacaaaagttacccaattatattcttttagaaaat
gtcaaaggttttgaagtatcttctacaagagagctgctgatacaaacaatagaagcctgt
gactttcagtatcaagaattcttattatctccttcctctctaggcattccaaactccagg
ctacgatattttctcattgcaaagcttcagtcggagcctttccctttccaggcccctgga
cagatactgatggagtttcctaaaattgtaactgttgagccacaaaaatatgcagtagtt
gacaaaagtaagctaagagcaaagagaactgggccacgcatctgcactgagagcagcagc
acacagtgttctggaaaagatgccattctctttaagcttgaaactgcagaagaaatggac
aggaaacaccagcaagacagtgacgtctctgtgcagatgctgaaagacttccttgaagat
ggcgacatggatcagtacctcttagcaccaaggtcactgctgcggtacgctctcttacta
gacatcgtgaggcccacttccagaaggtccatgtgcttcactaaagggtatggaagctac
atagaggggacaggctccgtgttacagactgcagaggatgtgcagattgagaatatctac
aaatctcttaccgatttgccaccagaagaaaagatagctaagttgtcaatgcttaaactg
cgatatttcacacctaaagaaattgcaaatctccacggctttcctccagaatttgggttt
cctgagaagacgacagtaaagcagcgttaccggctgcttggcaacagcctcaacgtacat
gtagtagcagagctcctcacagtcctgtgtgaaggatggggaagtgcctcggaggggtcg
cagtgtgcctctaattccagacagtaa
DBGET
integrated database retrieval system
