Mastomys coucha (southern multimammate mouse): 116089804
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Entry
116089804 CDS
T07224
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04014
Ras signaling pathway
mcoc04015
Rap1 signaling pathway
mcoc04020
Calcium signaling pathway
mcoc04024
cAMP signaling pathway
mcoc04080
Neuroactive ligand-receptor interaction
mcoc04713
Circadian entrainment
mcoc04720
Long-term potentiation
mcoc04724
Glutamatergic synapse
mcoc05010
Alzheimer disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05017
Spinocerebellar ataxia
mcoc05020
Prion disease
mcoc05022
Pathways of neurodegeneration - multiple diseases
mcoc05030
Cocaine addiction
mcoc05031
Amphetamine addiction
mcoc05033
Nicotine addiction
mcoc05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
116089804 (Grin1)
04015 Rap1 signaling pathway
116089804 (Grin1)
04020 Calcium signaling pathway
116089804 (Grin1)
04024 cAMP signaling pathway
116089804 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116089804 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116089804 (Grin1)
04720 Long-term potentiation
116089804 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
116089804 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116089804 (Grin1)
05014 Amyotrophic lateral sclerosis
116089804 (Grin1)
05016 Huntington disease
116089804 (Grin1)
05017 Spinocerebellar ataxia
116089804 (Grin1)
05020 Prion disease
116089804 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
116089804 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
116089804 (Grin1)
05031 Amphetamine addiction
116089804 (Grin1)
05033 Nicotine addiction
116089804 (Grin1)
05034 Alcoholism
116089804 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116089804 (Grin1)
Ion channels [BR:
mcoc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116089804 (Grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
116089804
NCBI-ProteinID:
XP_031225176
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSARHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPTDITGPLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcacctgctgacattcgccctgcttttctcctgctccttcgcccgcgcc
gcttgcgaccccaagattgtcaacatcggcgcggtgctgagcacgcgcaagcacgagcag
atgttccgcgaggcagtaaaccaggccaataagcgacacggctcttggaagatacagctc
aacgccacttctgtcacccacaagcccaacgccatacagatggccctgtcagtgtgtgag
gacctcatctccagccaggtctacgctatcctagttagtcacccgcctactcccaacgac
cacttcactcccacccctgtctcctacacagctggcttctacagaatccctgtcctggga
ctgactacccgaatgtccatctactctgacaagagcatccacctgagcttccttcgcacg
gtgccaccctactcccaccagtccagcgtctggtttgagatgatgcgagtctacaactgg
aaccatatcatcctgctggtcagcgatgaccatgagggccgggcagctcagaagcgcctg
gagacattgctggaggagcgtgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcggagaaggtgctgcagtttgaccca
ggaaccaagaatgtgacggctctgctgatggaggcccgggaactggaggcccgggtcatc
atcctttctgcaagcgaggacgacgctgccaccgtataccgcgcagctgcgatgctgaac
atgactggctctgggtacgtgtggctggtgggggagcgcgagatctctgggaacgctctg
cgctacgctcctgacggcatcatcggacttcagctaatcaacggcaagaacgagtcggcc
cacatcagtgatgctgtgggcgtggtggcacaggcagttcacgagctcctagaaaaggag
aacatcactgacccgccgcggggttgcgtgggcaacacaaacatctggaagaccggacca
ctgttcaagagggtactgatgtcttctaagtatgcggatggagtgactggccgtgtggaa
ttcaatgaggatggggaccggaagtttgccaactatagtatcatgaacctgcagaaccgc
aagctggtgcaagtgggcatctacaatggtacccatgtcatcccaaatgacaggaagatc
atctggccaggaggagagacagagaagcctcgaggataccagatgtccaccagactaaag
atagtaacaatccaccaagagcccttcgtgtatgtcaagcccacaatgagtgatggcaca
tgcaaggaggagttcacagtcaatggtgaccctgtcaagaaggtgatctgtacggggcct
aatgacacgtccccaggaagcgcacgtcacacagtgccccagtgctgctatggcttctgt
atcgacctgctcatcaagctggcgcggaccatgaattttacctacgaggtgcacctggtg
gcagatggcaagtttggcacacaggagcgggtaaacaacagcaacaaaaaggagtggaat
ggaatgatgggagagctactcagtggtcaagcagacatgattgtggcaccactgaccatc
aacaatgagcgtgcgcagtacatagagttctccaagccctttaagtaccagggcctgacc
attctggtcaagaaggagatccctcggagcacattggactcattcatgcagccttttcag
agcacactgtggttgctagtggggctgtcagttcatgtggtggcagtgatgctgtacctg
ctggaccgcttcagtccctttggccgattcaaggtgaacagtgaggaggaggaggaggat
gcactgaccctgtcctctgccatgtggttctcctggggcgtcttgctcaactctggcatt
ggggaaggcgccccccggagtttctctgctcgtatcttaggcatggtgtgggctggtttt
gccatgatcattgtggcttcctacactgccaatctggcagccttcctggtgctggatcgg
cctgaggagcgcatcacaggcatcaatgaccccaggctcagaaacccctcagacaagttc
atctatgcaactgtaaagcagagctcagtggacatctacttccggaggcaggtggagctg
agcaccatgtaccggcacatggagaagcacaattatgaaagtgcagctgaggccatccag
gctgtgcgggacaacaagctccatgccttcatctgggactcagctgtgctggagtttgag
gcttcacagaagtgtgatctagtgaccacgggtgagctgttcttccgctccggctttggc
atcggcatgcgcaaggacagcccctggaagcagaatgtttccctgtccatactcaagtcc
catgagaatggcttcatggaagatctggataagacatgggttcggtatcaagaatgtgac
tcccgaagcaatgcccctgcaaccctcacttttgagaacatggcaggggtcttcatgctg
gtggctggaggcatcgtagctgggatcttcctcattttcattgagatcgcctacaagcga
cacaaggatgcccgaaggaagcagatgcagctggcttttgcagccgtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgcagtaccatcccactgatatcacgggcccgctcaacctctcagatccctcggtcagc
accgtggtgtga
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integrated database retrieval system
