Mastomys coucha (southern multimammate mouse): 116090910
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Entry
116090910 CDS
T07224
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116090910 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116090910 (Polr1b)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116090910 (Polr1b)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116090910 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
116090910
NCBI-ProteinID:
XP_031227723
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDVDGRWRNLPSGPSLKHLTDPSYAVPPEQQKAALQDLTRAHVDSFNYAVLEGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPSVPKGTICKELNVYPAECRGRRSTYRGKLTADISW
AVNGVPKGIIKQFLGYVPIMVKSKLCNLYNLPPRVLIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGLGYTQFGVSIHCVREEHSAVNMNLHYVENGTVMLNFIY
RRELFFLPLGFVLKALVSFSDYQIFQELTKGKEEDSFFKNSVSQMLRIVMEEGCHTQKQV
LDYLGERFRVKLNLPDWYPNVEAAEFLFNQCICIHLKSNTDKFYLLCLMTRKLFALARGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKMENWLVSIKISFDKRAQKANVSINNENLMKIF
SMGTELTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLTAVCEVVTKFVYTASIPALLCGLGVT
PVDAAPCRPYSDCYPVLLDGVMVGWVDKELAPEVADTLRRFKVLKEKRIPPCMEIALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNIAIFEDEVFGGVSTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPCMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFTHGSVYKSEFID
LSEKFKQGDDSLVFGVKPGDPRVMQKLDDDGLPFIGAKLEFGDPYYSYLNLNTGEGFVVY
YKSKENCVVDNIKVCSNDTGSGKFKCICITIRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMMPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDII
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgacggccggtggcggaacctgcccagcgggcccagcctaaagcacttaacc
gacccctcgtacgcggttcccccggagcagcaaaaggcggctttgcaggacctgactcgg
gcgcacgtggactctttcaactacgcggtgctggaggggctgagccacgcggtgcaggct
atacctccctttgagtttgctttcaaagatgagcgcatatctcttactattgtggatgct
gtcatcagtccaccctcagtgcccaaagggaccatctgcaaagagctcaacgtttatcca
gctgaatgccgtggccggaggagcacctaccgagggaagctgacggctgatatcagctgg
gccgtgaatggagtccccaaaggaatcattaagcagtttcttggctatgttcccatcatg
gtgaagtccaagctttgcaacttatacaacctccctcctcgagtcctcatcgagcaccat
gaggaggcagaggaaatgggcggttattttataatcaatggcatagaaaaagtcatccgc
atgttgattatgccccggagaaatttccccatcgcaatggtaaggccgaaatggaaaagc
agagggctcggctacactcagttcggggtttccatacactgtgtgagagaagagcattcc
gctgtcaatatgaaccttcactatgtggagaacggcacggttatgttaaactttatttac
cggagagagctgttttttcttcctttgggatttgtacttaaggcactcgtgagcttttct
gattatcagattttccaggagctcaccaaaggcaaagaggaggactctttttttaagaat
tctgtttctcagatgctgcggattgtaatggaagagggctgtcacacccagaagcaggtc
cttgactatctgggtgaacgcttcagagtaaagctcaaccttcctgattggtaccctaat
gtggaagctgctgagttcctgtttaaccagtgcatctgcatccacttgaaatccaacact
gacaagttctacctgctctgcctcatgacccggaagctgttcgctttagccagaggagaa
tgcatggaggacaaccctgatagtttagtgaaccaagaagtccttacccctgggcagctc
ttcctgatgtttctgaaggaaaaaatggaaaattggctggtatctattaaaatatctttc
gataagagggctcagaaggccaatgtttccataaacaatgaaaatttgatgaagattttt
agtatgggaacagagctaacaagaccatttgaatatcttcttgctactgggaatcttcgt
tctaaaacaggtcttggctttctgcaagattctggcctgtgtgttgtggctgacaagctg
aacttcattcgctatctctcccatttccgctgtgtgcacagaggggctgactttgccaaa
atgaggaccaccaccgtgcgcaagctgctgccagaatcctggggcttcctctgccctgtg
cacactccagacggggcgccgtgtgggctgctgaaccacctaactgccgtgtgtgaggtt
gttaccaagtttgtgtacacagcgtctattccagccttgctctgtggcttaggagtcact
cctgttgatgcagcaccatgtcgaccatacagtgactgctaccccgtcctgctggacggc
gtcatggtgggctgggtggataaggagcttgctcctgaagttgcagatactctccgtcga
tttaaggtgttgaaagaaaaaagaattcctccctgtatggagatcgcgctgattcccatg
acaggaaaaccaagcctgtacccagggctcttcctctttaccaccccctgcaggctggtg
aggcctgtgcagaacttggaactgggcaaagaagagctcattggaactatggaacagctc
ttcatgaacattgccatctttgaggacgaggtttttggtggagtgtccacacaccaggag
ctcttccctcacagcctgctgagcgtgatcgccaacttcatccccttctctgatcacaac
cagagtcctcggaacatgtaccagtgccagatgggtaagcagaccatgggctttccactg
ctcacttaccaagaccgatcagataataaactctatcgactccagacgcctcagagccct
ctagtgagaccatgcatgtatgattactatgacatggacaactatccaatcgggacaaac
gccattgtagctgtgatctcctacaccggctatgatatggaagatgccatgattgtgaac
aaggcttcctgggaacgaggcttcactcacggaagtgtctacaagtctgagttcatcgac
ctctcagaaaaatttaagcaaggagacgatagtctggtatttggggtcaaacctggtgac
ccacgggttatgcagaagctggacgatgatggattgccattcataggagcaaagctggag
tttggtgatccttactacagctacctaaacctcaatactggggaaggcttcgtggtttac
tataagagtaaagaaaactgtgttgtggacaacatcaaagtgtgtagcaatgacacaggc
agtgggaagttcaagtgcatctgcatcacaatccgtgtcccccggaacccaactattgga
gacaagtttgccagccgtcatgggcagaagggcatcttgagcagattgtggccagctgag
gacatgcctttcactgagagtgggatgatgccggacattctgtttaatcctcatgggttt
ccctcccgtatgaccatagggatgttaatcgagagcatggctgggaagtctgcagctctg
catggtctctgccatgatgctacacccttcatcttctccgaggagaactctgccttagag
tactttggtgaaatgttaaaggctgctggctacaacttctacggcactgagagattgtac
agtggcatcagcgggatggagctggaggctgacattttcattggtgtggtttattaccag
cgcttacgacacatggtgtcagacaaattccaagtcagaacaactggagccagggacaaa
gtcaccaaccagcccatcggggggcggaatgtccagggtggaatccgctttggagagatg
gaacgggatgctctgttggcacatggtacatcttttcttcttcatgaccggctcttcaac
tgctctgaccgttctgtcgcccacgtgtgtgtgaagtgtggcagtttgctttctccgctg
cttgagaagcctcctccgtcgtggtctgcgatgcgcaacagaaaatacaactgcactgtc
tgtggccgcagtgacaccatcgacactgtctctgtgccgtatgtcttccggtactttgta
gctgagctggcagccatgaacatcaaagtgaaactggacatcatttaa
DBGET
integrated database retrieval system
