Mastomys coucha (southern multimammate mouse): 116093675
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Entry
116093675 CDS
T07224
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04064
NF-kappa B signaling pathway
mcoc04514
Cell adhesion molecules
mcoc04668
TNF signaling pathway
mcoc04670
Leukocyte transendothelial migration
mcoc04933
AGE-RAGE signaling pathway in diabetic complications
mcoc05143
African trypanosomiasis
mcoc05144
Malaria
mcoc05417
Lipid and atherosclerosis
mcoc05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
116093675 (Vcam1)
04668 TNF signaling pathway
116093675 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116093675 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116093675 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
116093675 (Vcam1)
05143 African trypanosomiasis
116093675 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116093675 (Vcam1)
05418 Fluid shear stress and atherosclerosis
116093675 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
116093675 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcoc04090
]
116093675 (Vcam1)
04091 Lectins [BR:
mcoc04091
]
116093675 (Vcam1)
CD molecules [BR:
mcoc04090
]
Proteins
116093675 (Vcam1)
Lectins [BR:
mcoc04091
]
I-type lectins (Siglecs)
116093675 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set
V-set
C2-set_2
Ig_5
ICAM_N
Ig_4
Ig_6
ICAM1_3_5_D2
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
116093675
NCBI-ProteinID:
XP_031231116
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MPGKMVAIFGASLVLGILFAVSQAFKVEISPEHSTIAQIGDSMALTCSTTGCESPSFSWR
TQIDSPLNGKVRTEGAKSILTMDPVSFENEHSYLCTATCGSGKLERGIQVDIYSFPKDPE
IQFSGPLEVGKPVVVKCVAPDVYPVDRLEINLFKGDQLLDSQAFLEEMAKKSLETKSLEV
TFTPVIEDIGKALVCRAKLLIDQTDSISKERETIKELQVYTSPTNTVISVHPSTRLHEGG
AVTMTCSSEGLPAPEIFWGKKLGNEVLQLLSGNATLTLIAMRMEDSGIYVCEGVNLIGRD
KTEVELVVQEKPFTVDISPRSPVVAQIGDSVVLTCVAVGCDSPSFSWRTQTDSALSGEVK
TEGAKSTLTLSSVSFEDEEFYLCAVTCLQRTLEKRTRVELYSFHEDPEIEMSGPLIHGKP
VTVNCTVPNVYPFDLLEIELLKGETILKHFRYFGWEMGIKSLEAKSLETTFIPTTEDTGK
ALVCLAKLHSAEMNSEPKQRQSMQLLYVNVAPKETTIWVSPSPVLEEGSPVNLTCSSDGF
PAPQILWSRQLNNGELQPLSENTTLTFVSTKMEDSGIYVCEGINQAGISRKSVELIIQVS
QKDIQLTVFPSKSVQEGDTVIISCTCGNVPETWIILKKKAKTGDMVLKSVDGSYTILKAQ
LQDAGVYECESKTEVGSQLRSLTLDVKGRENDKGSFSPELLALYCASSLVIPAIGMIIYF
ARKANMKGSYSLVEAQKSKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggtcgcgatctttggagcctcactggtacttgggatactgtttgca
gtctctcaggcttttaaagtcgagatctcccctgaacacagcacgatcgcgcagatcggg
gactccatggccctgacttgcagtaccacaggctgcgagtcaccatcgttctcctggaga
acccagatagacagcccactcaatgggaaggtgaggacagagggggccaagtccattctg
acgatggatcctgtcagttttgagaatgaacattcttacctgtgcacagcaacatgtggc
tctgggaagctggaaagaggaatccaagtggacatctactctttccctaaggatccagag
attcaattcagtggccccctggaggttgggaagccagtcgtggtcaagtgcgtggctcca
gacgtttacccggttgacaggctggagattaatctgttcaagggtgaccagctcctggac
agtcaggcgtttttagaagagatggcaaagaagtctctggaaaccaagagtttggaagta
acctttactcccgtcattgaggatattgggaaagctcttgtttgccgagctaaattactc
attgaccaaactgattctatatccaaagaaagggagactatcaaagaactacaagtctac
acatctcccacgaacacagtgatctctgtacatccctccacaaggcttcatgagggtggc
gctgtgactatgacctgttccagcgagggtctaccagctcctgagattttctggggcaag
aaattaggtaatgaagttctccagctcctctcaggaaatgccaccctcaccttaattgct
atgaggatggaagattctggaatctatgtgtgtgaaggagttaatctgattgggagagac
aaaacagaggtggaattagttgttcaagagaaaccgtttactgttgacatttccccccga
tctccagtggttgcacagattggggattcagttgttctgacatgtgttgctgttggctgt
gactccccgtctttttcttggaggacccagacagacagtgccctcagtggggaggtgaaa
acagagggggccaaatccacactgacgctgagctctgtgagttttgaggatgaagagttt
tacctgtgtgctgtgacctgtctgcaaaggacactggaaaagagaaccagggtggagctt
tactcattccacgaagacccagaaattgaaatgagtggaccacttatacatgggaaacct
gtcactgtcaactgcacggtccctaatgtgtacccctttgaccttctggagattgaatta
ctgaagggggagactatactgaagcattttagatattttgggtgggaaatgggcataaag
tccctagaggccaaaagtttggagacgaccttcatccccaccactgaagacactgggaaa
gctcttgtttgccttgctaagttacacagtgccgaaatgaactctgaacctaaacagagg
cagagtatgcaacttctttatgtcaatgttgcccccaaggaaaccaccatctgggtcagc
ccctctcctgtcctagaggagggcagccctgtgaacttgacctgttcaagtgatggtttt
ccagctccccaaatcttgtggagcagacagctaaataatggggaactgcagcctctttct
gaaaatactacactcaccttcgtgtctacaaaaatggaagactctggcatttatgtgtgt
gaagggattaaccaggctggaattagcagaaaatcagttgaactgattatccaagtctct
cagaaagacatccagcttacagtctttccatctaagagcgtccaagaaggagacaccgtc
attatctcctgcacttgtggaaatgtgcccgaaacatggataatcctgaagaagaaagcc
aagacgggagacatggtgttaaagtctgtggatggctcatacaccatcctcaaggcacag
ctgcaggatgctggcgtatacgagtgtgaatctaaaacggaagttggctcacaattaaga
agtttaacacttgatgtgaaaggaagagaaaatgacaagggctctttttcccctgaactt
cttgcactctactgtgcatcctccttggtaatacctgccatcgggatgatcatttacttt
gcgagaaaagccaacatgaaaggatcgtacagtctggtggaggcacagaaatcaaaagtg
tag
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