Mastomys coucha (southern multimammate mouse): 116100741
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Entry
116100741 CDS
T07224
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
mcoc05200
Pathways in cancer
mcoc05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116100741 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116100741 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
116100741 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116100741 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116100741 (Tpr)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116100741 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
116100741
NCBI-ProteinID:
XP_031240340
LinkDB
All DBs
Position
Unknown
AA seq
2434 aa
AA seq
DB search
MTSRGFDGSRRGSLRRAGARETSSESADGVAQASGFRASPCSFASPSAAAATTPADMAAV
LQQVLERPELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKFKVESEQQYFEIEKRLSQS
QERLVNETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLGIQSQFTRAKEELEAEK
RDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVAVKYREKRLE
QEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVLRLEEQMNGLK
TSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELT
RAVDELHRLLKEAGEANKTIQDHLLQLEESKDQMEKEMLEKIGKLEKELENANDLLSATK
RKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKQENKRINKYLD
EIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEDTDKANKHSSVLER
DNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIE
ELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENSLTELEQLRESRQHQMQLV
DSIVRQRDMYRILLSQTTGMAIPLQASSLDEISLLSTPKRSSTSQTVSTPAPEPVIASTE
AIEAKAALKQLQEIFENYKKEKIDSEKLQNEQLEKLQEQVTDLRSQNTKISTQLDFASKR
YEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENL
KKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKL
EHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKDIATL
KQHLSNMEAQLASQSTQRSGKGEPGDRDDVDDLKSQLRQAEEQVNDLKERLKTSTSNVEQ
YRAMVTSLEDSLNKEKQVTEEVHKNIEIRLKESAEFQTQLEKKLMEVEKEKQELQDDKRK
AIESMEQQLTELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYER
ELMLHAADVEALQAAKEQVSKMTSVRQHLEETTQKAESQLLECKASWEERERALKDEVSK
SVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKEVVQAPLNVSLNEEGKSQEQILEILRFIR
REKEIAETRFEVAQVEGLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMK
KTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAE
KKLLEEDVKRWKARNQHLINQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGRLKAEIAR
SNASLTNNQNLIQSLKEDLSKVRSEKESIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQ
FEELKAQQNKAMETSTQSSGDHQEQHISIQEMQELKDTLSQSETKTKSLEGQVENLQKTL
SEKETEARSLQEQTVQLESELSRLRQDLQDKTTKEEQLRQQMNEKDEKTWKAIAVARSKI
AQLSGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQERH
LEQRDEPQEPTNKAPEQQRQITLKSTPASGERGTASTSDPPTANIKPTPVVSTPSKVTAA
AMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFGST
SGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVVQSS
PVERPSTSTAVFGTVSATPSSSLPKRTRDEEEGSATEAGDQVSDDTVEMPLPKKLKTVTP
VGTEEEVMAEESTDGEVETQAYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQ
SDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEDDDDDEEDDTGMGDEGE
DSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGTESNQRAADSQNSGEGNTSAAE
SSFSQEVAREQQPTSASERQTPQAPQSQQPTSASERQTPQAPQSPRRPPHPLPPRLTIHA
PPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGF
AEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGR
SVPTTPLQVAAPVTVFTEGTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVFVE
AESEGVSSEAGLEIDSQQEEEPVQAPDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQ
TTLRQGVRGRQFNRQRGISHAMGGRGGINRGNIN
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgaggttttgacgggtcccgccgcgggagtctccggcgggcaggcgcgcgg
gagacctcgagcgagtcagcggacggtgtggctcaggcttctgggttccgcgcttctcct
tgctccttcgcttctccttcggccgctgccgccacgaccccggccgacatggcggcggtg
ttgcagcaagtgctggagcgcccggagctgaacaagctgcctaagtcaacccagaacaaa
cttgagaaattcctagctgaacagcagtccgagatcgactgcctgaaggggaggcacgag
aaatttaaggtggagagtgaacagcaatactttgagatagagaagaggctgtcccagagt
caagagaggcttgttaatgaaacccgggagtgtcagaacttgaggctggagcttgagaag
ctaaataaccaagtaaaagtgttaactgagaaaaacaaagaactggaaactgctcaagac
cgtaatctaggcattcagagccagtttacaagagcaaaggaagagttagaggctgaaaaa
agagatttaatcagaaccaatgagaggttatctcaggaagttgaatatttaacagaggat
gttaaacgtctaaatgaaaaacttaaagaaagcaatacaacaaagggtgaacttcagtta
aagctggatgaacttcaagcttctgacgttgctgtgaagtatcgagaaaaacgcttagaa
caagaaaaggaattgctacacaatcagaattcatggctgaacacagagttgaaaaccaaa
actgatgagctattggctctaggaagagaaaaaggaaatgaaattctggaacttaagtgt
aatcttgaaaacaaaaaagaagaggttttgagactggaagaacagatgaatggcttgaaa
acatcaaacgaacatcttcagaaacatgtagaggatttgttgacaaagttaaaagaggcc
aaagaacagcaggccagcatggaagagaaattccacaatgaattaaatgctcacatcaag
ctctctaatctatacaagagcgctgctgatgactcagaggcaaagagtaatgaactaact
cgggcagtggacgagctgcacagactgctcaaagaagctggagaagccaacaaaacaata
caagatcatcttctacaattggaagaatctaaagatcagatggaaaaagaaatgcttgag
aaaataggaaaattggagaaggaattggagaacgcaaatgacctgctttccgctacaaaa
cgtaaaggagctatattgtctgaagaagagcttgcagccatgtctcctactgcagcagcc
gtagctaaaattgtaaagcctggcatgaaattaactgagctgtataatgcttatgtggaa
actcaggatcagttgcttttggagaaacaagaaaataaaaggattaacaagtatctggat
gagatagtgaaagaagtggaagccaaagcaccaattttgaaacgccagcgtgaagagtat
gagcgtgcacagaaagctgtggccagtctgtctgcaaagcttgagcaagctatgaaggag
attcagcgattgcaggaggatactgataaagccaacaaacattcatcagtccttgaaagg
gacaatcagagaatggaaatacaaataaaagatctttctcaacagattagagtgctcttg
atggaacttgaagaagcaaggggtaatcatgtaattcgggatgaggaggtcagctctgct
gacataagtagttcgtctgaagtaatttcgcagcatctagtatcttacaggaacattgaa
gagcttcagcagcagaatcagcgtctgctgtttgctcttcgagaacttggggaaaccagg
gaacgagaagaacaagagacaacgtcctctaaaattgctgaacttcaacataaacttgag
aactctctcactgaactggaacagctccgtgagtcacgacaacatcagatgcagcttgtt
gattccatagttcgtcagcgtgacatgtaccgaattttattgtcacaaacaacaggaatg
gccattccattacaagcttcaagtttagacgaaatttctcttctgtcaactccaaaacgt
tcaagtacatcacagactgtttctactcctgctcccgaacctgtcattgcatccacagag
gctatagaagcaaaggctgcccttaaacagttgcaggaaatctttgagaactataaaaaa
gaaaaaatagacagtgaaaaacttcaaaatgagcagctagagaaacttcaagaacaagtc
acagacctgcgctcacaaaacaccaaaatttctactcagctagattttgcttctaaacgt
tatgaaatgctgcaagataatgtagaaggatatcgccgagaaataacatctctacaagag
aggaatcagaaactcactgcaactactcagaagcaggaacagatcatcaacacgatgaca
caagacctgagaggagccaatgaaaagctggctgtcgcagaagtaagagcagagaatttg
aagaaggaaaaagaaatgcttaagttgtctgaagtccgtctgtctcagcaaagagagtct
ttgttagctgaacagaggggacagaacttgttgctgactaatctacaaacaatccagggc
atactagagcgatctgagactgaaaccaaacaaaggctgagtagccagattgaaaaattg
gagcatgagatctctcacctgaagaagaagttggaaaacgaggtggagcaaagacataca
cttacgaggaacctagacgttcaactcttagataccaagagacagctagatacagaaata
aaccttcatcttaacacaaaggaactgttaaaaaatgctcagaaggacattgctacactg
aaacagcaccttagtaatatggaagcccagcttgcttctcagtccacacagagaagcggc
aaaggtgagcctggtgacagagatgacgttgatgatcttaaaagtcaactaaggcaggct
gaagaacaggtcaatgacttgaaggagagactcaagacaagtaccagtaacgtggagcag
tatcgagccatggtgaccagcttagaagattccctgaacaaggagaaacaggtgactgag
gaggtacataagaacattgaaattcgcttgaaagaatcagcagagtttcagacacagttg
gagaaaaagttgatggaagtagagaaggagaagcaagaacttcaggatgacaagaggaaa
gccattgagagcatggaacagcaattaactgagctgaagaaaacactgtctagtgttcag
aatgaagtacaagaagctcttcagagagcaagcacagctctaagtaatgaacagcaagcc
aggcgtgactgtcaggaacaagctaaaatcgcagtggaagctcagaataaatatgagaga
gaattgatgctacatgctgctgatgtcgaagctctgcaagctgccaaggaacaggtttca
aaaatgacatcagtccgtcagcatttggaagaaacaactcagaaagcagagtcacagttg
ctggagtgtaaagcatcttgggaagagagagagagagcattgaaggatgaagtttccaag
agtgtgtctcgctgtgaagacctagagaaacaaaacagactacttcatgatcaaatcgaa
aaattaagtgacaaggtggtcacttctatgaaagaggttgtgcaagcaccattaaatgta
tctctcaatgaagaaggaaaatctcaagaacaaattttagaaattcttagatttattcga
cgagaaaaagaaattgctgaaactaggtttgaagtggctcaggttgagggtctgcgatat
cgacagagagttgaacttctagaacgggagttgcaagaactgcaggatagcctgaatgca
gaaagggaaaaggtgcaggtaactgcaaaaacaatggcgcaacatgaagaactgatgaag
aaaactgaaacaatgaatgttgttatggagactaataagatgctgagggaggaaaaggaa
aggctggaacagaacctccaacaaatgcaagccaaggtgaggaaactggagttagacatt
ttacccttacaagaagccaatgctgagctgagcgagaaaagtggcatgctccaggcagaa
aagaagctactagaagaggatgtcaagcgttggaaagcacggaaccagcatctaataaat
caacagaaagatccagatacagaagagtatcgaaagttgctttctgaaaaggaaattcac
actaagagaattcagcagctaaatgaagaagttggacgacttaaggctgaaattgcaaga
tcgaacgcatccttgactaacaaccagaatttaatccagagtctgaaggaagatttaagt
aaagtacgatctgaaaaggaaagcattcagaaagatttagatgccaaaataattgacata
caagaaaaagtcaaaacaatcactcaagtcaagaaaattggacgcaggtacaagactcag
tttgaagaacttaaagctcagcaaaataaggccatggaaacttccactcagtcttcagga
gaccatcaagaacagcacatctctattcaggaaatgcaggagctcaaagataccctcagc
caatctgaaacaaagacaaagtcacttgagggtcaagtagagaacctgcagaagacatta
tctgaaaaagagacagaagcaagaagtctccaggaacagaccgtgcagcttgagtctgaa
ctgtcacgccttcgtcaggacctccaggataaaaccacaaaggaggagcaactccgacag
caaatgaatgaaaaggatgaaaaaacatggaaggcgattgcagtagccagatcaaaaatt
gcacaactatctggtgttaaagatcagttaactaaagaaaatgaagagcttaaacaaaga
aatggagctttagatcagcagaaagatgaactcgatgtccgaatgactgctcttaagtcc
cagtatgaaggtcggattagtcgcttagagagagagctcagagagcatcaagagagacac
cttgagcagagagatgagcctcaggaacccactaataaggctccagagcagcagagacaa
atcacactgaagagcactccagcttctggtgaaagaggaactgccagcacatcagaccca
ccaacagccaatatcaagccaactcctgttgtttctactccaagtaaagtgacagctgca
gctatggctgggaataagtcgacacccagggcaagtatccgcccaatggttacacctgca
actgtcacaaatccaaccactaccccaacagcaactgtaatgcctactacacaggtggag
tcacaggaagctatgcagtcagaagggcctgtggaacatgttccagtatttggaagcaca
agtggatctgttcgttctactagtcctaatgttcagccctccatttctcagcccatccta
actgtacagcagcaaacacaggctactgcttttgtacaacccactcaacagagtcaccct
caaattgagcctgcaaatcaagagttgtccccaaacatagttgaggtggtacaaagctca
ccagtggaacggccatctacttccacagcagtatttggcactgtttcagctaccccaagt
tcctccttgccgaagcgcactcgggacgaggaggagggcagcgccacggaagcaggagac
caagtctctgacgacacagtggaaatgcctctcccaaagaagctgaagacagtcacgcct
gtgggaaccgaggaagaagtgatggcagaagaaagtactgatggagaggtagagactcaa
gcctataatcaggattctcaggattccattggagaaggagtcacccagggagattataca
ccaatggaagacagtgaagaaacatcacaatctctacaaatcgatcttggaccacttcaa
tcagatcagcagactacttcctctcaagatggtcaaggcaaaggagatgatgtaattgta
attgacagtgatgatgaggatgatgatgaagaaaatgatggagaacatgaggattatgaa
gaagatgaagatgatgatgatgatgaagaagatgacacggggatgggagatgagggtgaa
gatagtaatgaaggaactggtagtgcagatggtaatgatggctatgaagctgatgatgct
gagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtggaactgaa
agtaatcagagagctgctgattctcaaaacagtggtgaaggaaatacaagtgcagcagag
tcttcattctctcaggaggttgccagagaacagcagcccacctcagcttctgagagacag
accccacaagcaccgcagtcacagcagcccacgtcagcgtctgagagacagaccccacaa
gcaccgcagtcaccaaggcgtccaccgcatcctcttcccccacgcctgaccattcacgcc
ccacctcaggagctgggaccaccagttcagagaattcagatgacccggaggcagtctgta
gggcgtggtcttcagttgactccaggaataggtggcatgcaacaacacttctttgatgat
gaagacagaacagttccaagtactccaactcttgtggtgccacatcgcactgatgggttt
gctgaagcaatccattccccacaggttgctggtgttcctagattccggtttgggccacct
gaagacatgccacagacaagttccagtcactctgatcttggccaacttgcttctcaagga
ggtttgggaatgtatgaaacacccctctttctggctcatgaagaagagtctggtggccgc
agcgttcccactacgcctctccaagtagcagccccagtgactgtgtttactgagggtacc
acctctgatgcttcagagcatgcctctcagtctgttccaatggtgacaacgtctacgggc
actttatccacgacaaatgaaacagcagcaggtgatgacggagatgaagtatttgtagag
gcggagtctgaaggtgttagttcagaggcaggcctagaaattgatagccagcaggaagaa
gagcctgtccaagcacctgatgaatcagatcttccctcaaccagccaagaccccccttcc
agctcctctgtagataccagtagtagtcagccgaagcctttcagacgagtaagacttcag
accaccttgagacagggtgttcgtggtcgtcagtttaaccgacaaagaggtataagccat
gcaatgggaggaagaggaggaataaatagagggaatattaattaa
DBGET
integrated database retrieval system
