Musca domestica (house fly): 101889577
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Entry
101889577 CDS
T03448
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mde
Musca domestica (house fly)
Pathway
mde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101889577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mde03400
]
101889577
DNA repair and recombination proteins [BR:
mde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101889577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
101889577
NCBI-ProteinID:
XP_005181193
UniProt:
A0A1I8M2R1
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MSKKLNSSFSKSGVGGSPKNTLFKYFSSPASQKKILKTSNDDNEEEIKDKENIKTQENGN
AVKEEKKAQRMDVSDDDDEEVVVGKKKRKRLVLVDSDDEEEDASPKSKKKSKDDSSFHGS
DEEEEEESSCSSASPSPKKKNLKQDEPKSKKVKLDASLVSGTFAEKLQQLQSSEDCKTTK
KQEAKCEEIVTTSTLDEPVIWPHQKLEFLKPDQIKDKQGRRPDHPDYDSSTLYVPAKFLD
SLTPGVRQWWVFKSENFDCVLFFKVGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEV
SFDKMASILVERGYKVARVEQTETPDMMTERCKRIKATKFDKVVRREICQVMNRGTRVFG
SQCSITPNYQASYMLAIVEKPHQTGGTSSYGICFVDTSIGDCYLGEFDDDKNCSRLHTLL
SHHMPVLVVLEKANIGEQTQDIMRTVLSGTLKEYMPANGSQQSTAEKTLKELAENYYACN
GDNWPLVLRTMQDESDHLGLTPHRDARLALKALGLCVNYMKKCKVAEKVLPMARYHLYEP
PDATSKSPMKKSPTMHRAHMVLDATTLMNLRITGEEHSLQSTLDQCCTKFGKRLLHHWLC
APSCNLAVIKDRQQAIAEFLENSSLLQGIRAVMAPLPDFERYLAQFHHFGSKLVQEKHPD
GRAILFEAKQYNKKNIQNFITILRGFETLLKIPSMFEGVSCSLLKHLSQNENNGGAFPNL
SKQLTFFKEAFDHAKASESGVIAPERGVDEDYDRVESKIQEIKDELEEYRIEQEKFFGCR
VVYFGAERKRYQLEIPESNARKVNSKYALEGQKKGAKPSRRYTTEETRTFLKRMLAAEDE
RNAILKDLSRRIFEKFSQHYELWKQCVDCVSEIDVLASLAEYARTQSTSMCIPEVVNLSE
GEQAFIEIEEGYHPCLSSDTYIPNGLSLGCNDTPALSLLTGPNMGGKSTLMRQVGLLTVM
AQIGAHVPAESCRLSLVDRIFTRLGAQDDIMSGHSTFLVELNETSLILKHATANSLVLLD
ELGRGTATYDGTAIAASVVNFLADLKCRTLFSTHYHNLIDFFHNDDRITLGHMACMVENE
DTEDPTQETVTFLYKYSAGACPKSYGFNAAKLAGMSHGIIKRAYALSKKVEAIALKRKIA
AKLVAAATVGCATPAQASNLKNLLIQLQQCHV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaattaaattcgagtttttccaagagtggtgtgggaggatctcccaaaaat
acactatttaagtacttcagttcgccggcgagccaaaagaaaatactcaagacatcgaac
gatgacaatgaggaagaaatcaaggacaaggaaaatattaaaactcaagaaaatggaaat
gctgtgaaagaagaaaagaaggctcagcgaatggatgtttccgatgatgacgacgaagag
gtggttgtgggcaagaaaaaacgtaaacgtttggtgttggtggactctgatgatgaagaa
gaggacgcttcgccaaaatccaaaaagaaaagtaaagatgattcctcatttcatggatct
gatgaggaggaagaggaggagtcttcatgctcgtcagcatctccatcgcctaaaaagaaa
aatctcaaacaagatgaacccaagtccaaaaaagtgaaattggatgcatccttggtttca
ggcacatttgccgaaaaactacaacaactccagtcgtcagaagattgtaaaaccaccaaa
aaacaggaagccaaatgtgaggaaattgtaacaacatcgacgcttgatgagccggttata
tggcctcatcaaaaattggaatttttaaaacctgaccaaatcaaagacaaacaaggacgt
agaccagatcatccggattatgatagctcaaccttgtatgtgcctgcaaaatttttggat
tctcttacgccgggcgttcgtcaatggtgggtctttaaatcggagaacttcgattgtgtt
ttgttctttaaagtgggaaaattctatgagttatatcacatggacgcagatgtgggtgtt
aatgagctgggctttacctatatgcgtggcgaatttgcccattccggttttcctgaggtt
tcttttgacaaaatggcctcaattttggttgagcgaggctataaagttgcccgtgtagag
caaactgaaacccccgacatgatgacggaacgttgtaaacgtattaaggccaccaaattc
gataaggtggtaagacgagagatatgccaagtgatgaatcgcggcactcgtgtctttggc
tcccagtgtagtattacacccaactatcaagccagttatatgttggccattgtggagaaa
ccccatcagacgggtggtaccagtagctatggtatttgttttgttgacacctcaattggt
gattgttatttgggtgaattcgatgatgataagaattgttcgcgcttgcataccttgtta
tcgcatcacatgccagttttggtggttttggaaaaggccaatattggcgagcagacacag
gatataatgagaactgtgttaagtggtactctaaaggagtacatgccggccaatggcagc
caacagagtacggctgagaagacacttaaagagttggcggaaaactattatgcctgcaat
ggtgataattggccgttggttttaagaacaatgcaagatgaatcagatcacttgggtttg
acaccacatcgggatgccagattggcgttaaaggcattgggtttgtgtgtaaattacatg
aaaaaatgtaaagtggctgaaaaggtattacccatggccagatatcatttgtacgaacca
ccagatgctacttcaaagagtcccatgaaaaaatcgccaaccatgcacagggcccatatg
gtcttggatgccacaacattaatgaatttacgtatcaccggcgaagaacactctttgcag
tccactttggatcaatgctgtacgaaatttggtaaacgcctgttgcatcattggctttgt
gccccgtcctgcaatttggctgtaattaaagatcgccaacaggcaattgcagagtttttg
gaaaactccagtctattgcagggaatcagagctgtgatggctccactgccagattttgaa
agatatttggctcaattccatcactttggtagtaaattggtacaggagaaacatcccgat
ggaagggctatactgttcgaggcaaagcagtataataaaaagaatatccagaatttcatt
accatactgagaggatttgagacattgcttaaaatacccagcatgtttgaaggagtctct
tgcagtctactgaaacatttaagccaaaatgaaaataatggtggagcttttcccaattta
agcaaacagctgactttcttcaaggaagcctttgatcatgccaaagcctctgagagcgga
gttattgcccccgaacggggcgtcgatgaagactatgatcgagtcgaaagtaaaattcaa
gaaatcaaagatgaattggaagaatatcgcatagaacaggagaaattctttgggtgtcgt
gtggtttattttggtgcagaacgtaagcgctatcaattggaaattcccgaatcaaatgcc
cgaaaggtcaatagtaaatatgccttggagggacagaagaagggtgccaaacctagcagg
cgttataccaccgaagagacaagaaccttcctcaaacgcatgctcgcagccgaagatgaa
cgtaatgcaatattgaaagatctgtcacgtcgcatctttgaaaagttctcacaacactat
gaactatggaagcaatgtgttgattgtgtgtccgaaatcgatgtccttgcttccctggcg
gaatatgcccgtacacagtcgacctcaatgtgtatacccgaagtggtaaacctttcggag
ggagaacaagcatttattgaaattgaagaaggctatcatccttgcctctcttctgataca
tatataccaaatggtttgtcattgggttgtaatgatacgccagccttatcattacttacc
ggccccaatatgggtggcaagagtacactaatgcgacaggtgggattactaacggtaatg
gcccaaattggtgcccatgtgccagccgagagttgtcgtttgtctttggtcgatcgtatc
tttacacgtttgggggcccaagatgacatcatgtccggacattctacatttttggtagaa
ttgaatgagacctctttgattctgaaacatgccaccgccaatagtttggtgttactggat
gagttgggtcgtggaactgccacctatgatggtactgccattgctgcttctgtggtgaac
ttcctggcagatctcaaatgtcgcaccttgttctctacacattatcacaatttaattgat
ttcttccacaatgatgatcgtattacattgggccatatggcctgcatggttgaaaatgag
gataccgaagatcctacccaagaaacggttacgttcctatataaatactcggctggcgct
tgtccaaaatcgtatggttttaatgctgcaaaattggctggcatgtctcatggcatcatc
aagagagcatatgcactctcgaaaaaggttgaggccatagccctcaaacgtaagattgcc
gctaaacttgtggctgcagcaacggttggttgtgctacgccagcacaggccagtaacttg
aagaatcttctcatacaactgcaacagtgccatgtttaa
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