Musca domestica (house fly): 101890053
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Entry
101890053 CDS
T03448
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mde
Musca domestica (house fly)
Pathway
mde03020
RNA polymerase
mde03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101890053
09124 Replication and repair
03420 Nucleotide excision repair
101890053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mde03021
]
101890053
03400 DNA repair and recombination proteins [BR:
mde03400
]
101890053
Enzymes [BR:
mde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101890053
Transcription machinery [BR:
mde03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101890053
DNA repair and recombination proteins [BR:
mde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101890053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
101890053
NCBI-ProteinID:
XP_005188839
UniProt:
T1PEM5
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYDNEDQMYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIDLQAEAQHTSGEIETPPRFLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKSKIVEGQAPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGTRGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFKNLLKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQNKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGYFRSVFYRSYKDSENKRIGDQEENFEKPNRQTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTMTLPENDDELDSTTKRFTKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgacaatgaagaccaaatgtatgaggaggagaatgcagaggaaatttcccat
gagttgtggcaagaagcttgttggattgtcataaacgcctactttgacgagaagggtctt
gtgcgacagcaactggacagttttgatgaatttattcagatgtccgtacagcgcattgtc
gaagactctccagccatagatttgcaagctgaagcccaacatacatcgggagaaatcgaa
acgccgccccgcttccttttgaaattcgaacaaatctacttatcaaaacctacacattgg
gaaaaggatggttcacccagtcctatgatgcctaacgaagcacgtttgcgaaacttaacc
tattcagccccgctctatgtcgatattaccaaatcaaaaattgttgaaggacaggcccct
gtcgagacacaacatcaaaagacatttattggcaaaattcccattatgttgcgttccaca
tattgtttgctgtcccagttaacagatcgtgatttaacagaattgaatgaatgtccattg
gaccccggcggctattttattatcaacggttccgaaaaggttctaattgcacaggagaaa
atggcaactaacactgtgtacgttttcagcatgaaagacggcaaatatgcctataaggct
gaaattcgttcttgtctcgaacacagttcacgtcccacgtccaccctctgggttaacatg
atggccagaggttcacagaatattaagaagtcagccattggtcaacgtattattgccatt
ttgccctatatcaaacaagaaattccaattatgattgttttccgcgctttgggttttgtg
gctgatcgtgatattttggaacacattatctacgactttgatgatccagagatgatggaa
atggttaagccatctttggatgaggcttttgtcgttcaggaacaaaatgttgctttgaat
tttattggtaccagaggtgcacgtcctggtgtaaccaaagacaaacgtataaaatacgcc
aaggaaattctgcaaaaagaaatgttgcctcatgtgggtgtttcagatttctgtgagaca
aagaaagcctactttttaggttatatggtacatcgtctgctgttggcctctttgggtcgt
cgtgaattggacgatcgtgatcactacggtaataagcgtttggatttggctggaccactt
atggctttccttttccgtggtctattcaaaaatctcctcaaagaagttcgcatgtacacc
cagaaatttatcgatcgtggaaaagatttcaatttggaattggccattaagacaaacatc
atcactgatggtttacgttattcattggccactggcaattggggtgaccagaaaaaggct
catcaggctcgtgctggtgtgtctcaggtgttgaatcggttaactttcgcctcaaccttg
tcacatttacgtcgtgtcaattcacccattggtcgtgatggtaaattggccaaacctcgt
caattgcacaacacattgtggggtatgttatgccctgccgaaacacctgagggagctgct
gtaggtctggtaaagaatctggctcttatggcctacatttctgttggttcacagccttcg
ccaattttggagttcttggaagagtggtctatggaaaatttggaagaaattgcaccttca
gccattgcagacgccacaaagatctttgtcaacggttgttgggttggtatacatcgtgac
cccgaacaattgatggccacattacgaaaactgcgcagacagatggatatcatcgtgtca
gaagtgtctatgattcgagatattcgtgaccgtgaaattcgtatttacacagacgctggt
cgtatctgtcgcccactgctcattgtcgaaaatggagctcttttgttaaaaaagactcac
gtagaaatgttgaaggaacgcgattacaataactacagctggcaagtgttggtagcatcc
ggcgtggtggaatatattgatactctggaagaggaaaccgttatgattgctatgtctccc
tacgatttaaaacaaaacaaagactatgcctattgtaccacttacacgcattgtgaaatc
catcctgctatgatattgggagtctgtgcttctattattcccttccctgatcacaaccag
tcaccccgtaacacctatcaaagtgctatgggtaaacaagctatgggtgtctacattacc
aatttccacgttcggatggacacactggcccacgtattgtactatcccatgaaaccattg
gttactacgcgttctatggaatacttgcgtttcagagaattgccagccggaattaattcc
attgtagccattctctgttataccggttacaatcaggaagattctgtcattttgaatgct
tctgctgtcgaaagaggatacttccgatctgtgttttaccgttcgtacaaagattcggaa
aataaacgcatcggggatcaggaagaaaactttgaaaaacctaatcggcaaacgtgccag
ggcatgcgaaatgcccattatgacaaattggatgatgatggtattattgcccccggcatt
cgtgtgtcaggtgatgatgtggtaatcggcaagacaatgactttacccgaaaatgatgac
gaacttgacagcacaacaaaacgcttcaccaaacgagatgcttcaacattcttgcgtaac
tctgaaactggtattgtcgatcaggtcatgttaacgttgaacagcgaaggttataagttt
tgtaagattcgtgtgagatcggtacgtattccacagattggagataagtttgcttcgcgt
cacggtcaaaagggtacctgtggtattcagtatcgccaggaggatatgccatttacatgt
gaaggtctagctcccgacattattattaatccccacgccattccatctcgtatgacaatt
ggccatttaattgaatgtctccaaggcaaacttggttcgaacaaaggcgagattggcgat
gctactccttttaatgatgctgtcaacgtacaaaaaatttccactttcctccaagagtat
ggctatcatttgcgtggcaacgaagtcatgtataatggtcacacaggtcgcaagattaat
gctcaggtcttcttgggtccgacatactatcaacgtcttaagcatatggtggacgacaag
attcactctcgagccagaggtccagtccagattttagtgcgacaacctatggaaggcaga
gctcgtgatggtggtttgcgtttcggtgagatggaacgtgattgtcaaatatcgcacggt
gctgcacagttcttgagagaacgtctattcgaagtctctgatccttatcgtattcatgtg
tgcaatttctgtggcctaattgctatagccaatttgcgcaacaacacctttgaatgcaaa
ggttgcaagaataaaacccaaatctctcaagttcgtttgccctatgcagcaaaattattg
ttccaagaactaatgtccatgaatattgcgccacgtttgatggtggtttaa
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integrated database retrieval system
