Metabacillus dongyingensis: K8L98_23890
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Entry
K8L98_23890 CDS
T07997
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K8L98_23890 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdg03021
]
K8L98_23890 (rpoE)
03400 DNA repair and recombination proteins [BR:
mdg03400
]
K8L98_23890 (rpoE)
Transcription machinery [BR:
mdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K8L98_23890 (rpoE)
DNA repair and recombination proteins [BR:
mdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K8L98_23890 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
ColG_sub
Mnd1
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UAL52157
LinkDB
All DBs
Position
complement(4841259..4841813)
Genome browser
AA seq
184 aa
AA seq
DB search
MSISQYSKEQLKELSMVEVAYDLMTEKKQPYLFKDLVKEISQIIGLTQSQVEDKISQFYT
DLNIDGRYICVGENTWGLRSWYPYEQIEEEVVPVAKPKKKKAKKAVAEDLEIDDFDEVDE
EELEYDDIEEYEDDTDDDLDDDDDLDDDAEEIDEVIEDEEFDLEEEELEEDLDEDLEEEE
EEDL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgagtatttcacaatattccaaggaacagcttaaagaattgtcaatggttgaagttgca
tacgacctgatgacagaaaaaaaacagccatatctttttaaagatttagtaaaagagatc
agccaaataatcggcttgactcaaagccaggttgaagataaaatttcacaattctacacg
gatttgaatatcgacggacgttatatttgtgttggggaaaatacttggggactgcgcagc
tggtacccatatgaacaaatcgaagaagaggttgtgccagtcgctaagcctaagaagaaa
aaagcgaaaaaagcggttgctgaagaccttgaaattgatgatttcgatgaagtggatgaa
gaagaattagaatatgatgacatcgaagagtacgaagacgatactgacgatgaccttgat
gacgacgacgatctggatgacgatgcagaagaaatcgatgaagtcattgaagacgaagag
ttcgatcttgaagaagaagagttggaagaagacctggacgaggatcttgaagaagaagag
gaagaagatttataa
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