KEGG   Methylorubrum extorquens DM4: METDI1141
Entry
METDI1141         CDS       T00947                                 
Name
(GenBank) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
mdi  Methylorubrum extorquens DM4
Pathway
mdi00330  Arginine and proline metabolism
mdi00480  Glutathione metabolism
mdi01100  Metabolic pathways
mdi01110  Biosynthesis of secondary metabolites
mdi04148  Efferocytosis
Module
mdi_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    METDI1141
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    METDI1141
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    METDI1141
Enzymes [BR:mdi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     METDI1141
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase Ribosomal_L27e
Other DBs
NCBI-ProteinID: CAX22758
UniProt: C7CE54
LinkDB
Position
complement(1049345..1051690)
AA seq 781 aa
MDFHRRFTVLMCTPAFDPDDLEGARVDQIVAAVEKRGFEVVRARRVEDASIAVQTDSAVG
CLVVDWGKRGLEGKAAALIDMMRKRGLEMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARGLVSRVTQYADTLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKVVL
GSLVAEDDLVLFDRNNHKAAHHGALLLAGGIPIFLETDRNAYGLIGPIYHEALDEGRIRE
KIRDNPLVKDREAWRKERPFRCAVIEQCTYDGTIYDAQAIVERIGHLCDYILFDEAWAGF
MKFHPLYQRRFAMGLTGLDETSPGIIATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPIFASLDVGAQMMKGRSGVVLWDDTIRLGIEWRKKARAIRKEF
EEREADPKRRWFFDPFVPDVVKGPEGTEIPWESVPTDALAADARYWELTPGAAWHGFTHV
APGFAITDPNKLTVLTPGFDRKTGAYAEHGVPAPIVAQYLRENRIVPEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVPLEEAMPEFVARRPKRYRGVRLRDLCADYHAFHR
ESGTSALQRKQFMPEHLPEMVMAPKAAAQMLTRNRVDYVPIAEAEGRVATTLMLVYPPGI
GTVLPGERLDERAKPMLDYFKMFEAAANLFPGFEAEIQGVYRESDPDGRIRFHTYVLREG
A
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggattttcaccgccgcttcaccgtgctgatgtgcacgcccgccttcgatccggatgat
ctggagggcgcgcgcgtcgatcagatcgtcgcggcggtggagaagcgcggcttcgaggtg
gtgcgggcgcggcgcgtcgaggatgcctcgatcgcggtgcagaccgactccgccgtcggc
tgcctcgtggtggattggggcaagcgcggactcgagggcaaggcggccgcgctcatcgac
atgatgcgcaagcgcggcctggagatgccgatcgtcatcatggtccgccgcaagcggctg
gaggacatcccggtcgagctgctcgacttcatcgacggctacatcttcctggcagaagaa
acgccggaattcatcgcccgcggtctcgtctcccgcgtgacgcagtatgccgacacgctg
aagacgccgttcttcggcgcgctcgtcgattacgccgaggagggcaaccagctctggacc
tgccccggccataacggcggcatcttctacaaccgctcgccgatcggccgcatcttcgtc
gagcatctcggcgaggcgatctttcgcgatgacctcgacaactcggtgctcgatctcggc
gacctgctgacccacgagggacccgcgctcaaggcgcagaaggaagcggcaaagatcttc
ggggcggaaaagacctatttcgtcctcaacggcacctcggcctcgaacaaggtcgtgctg
ggctcgctggtggccgaggacgatctcgtcctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgctgctggccggcggcatcccgattttcctcgagaccgaccgtaac
gcttacggcctgatcgggccgatctaccatgaggcgctcgacgaggggcgcatccgcgag
aagatccgcgacaacccgctcgtgaaggacagggaggcgtggcgcaaggagcgcccgttc
cgctgcgccgtgatcgagcaatgcacctatgacggcacgatctacgacgcgcaggcgatc
gtcgagcgcatcggccacctgtgcgactacatcctgttcgacgaggcctgggcgggcttc
atgaagttccacccgctctaccagcgccgcttcgccatgggcctgaccgggctcgacgag
acttcgccgggcatcatcgccacgcaatcgacccacaagcagctcgccagcttctcccag
gcctcgcagatccacacccgcgacgggcatatccgcggccagacccggcgggtcgagcac
aagcgcctgaacgagagcttcctcgtccacgcctcgacctcgccgttctacccgatcttc
gcctcgctcgatgtcggcgcgcagatgatgaagggccgctccggcgtcgtgctgtgggac
gacacgatccgcctcggcatcgagtggcgcaagaaggcccgcgccatccgcaaggagttc
gaggagcgcgaggccgacccgaagcggcgctggttcttcgaccccttcgtgcccgacgtg
gtgaaggggcccgagggcacggaaatcccgtgggaatccgtgccgaccgacgccctggcc
gccgacgcccgctactgggagctgacgccgggcgcggcgtggcacggcttcacccatgtc
gcgccgggctttgccatcaccgaccccaacaagctcaccgtgctcacccccggcttcgac
cggaagacgggggcctatgccgagcacggcgtgccggcgccgatcgtcgcgcaatacctg
cgcgagaaccggatcgtcccggagaagaacgacctcaactcgctgctcttcctgctgacg
ccgggcgtcgagtcgtcgaaggcgggcacgctcatctccggcctcgtcgccttcaagcgg
ctgcacgacgacaacgtgccgctcgaagaggcgatgccggaattcgtggcacgccggccc
aagcgctaccgcggcgtgcgcctgcgcgacctctgcgccgattaccacgccttccaccgc
gagtcgggcacctcggcgctccagcgcaagcagttcatgcccgagcacctgccggagatg
gtgatggcgcccaaggccgccgcgcagatgctgacccgcaaccgggtcgattacgtgccg
atcgcggaggccgaggggcgcgtcgccacgaccctgatgctggtctatccgcccggcatc
ggcaccgtgctgcccggcgagcgcctcgacgagcgggccaagcccatgctcgactatttc
aagatgttcgaggcggccgccaacctgttccccggcttcgaggccgagatccagggcgtc
taccgtgagagcgacccggacgggcgcatccgcttccacacctacgtcctgcgcgagggc
gcctga

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