Methylorubrum extorquens DM4: METDI1141
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Entry
METDI1141 CDS
T00947
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00330
Arginine and proline metabolism
mdi00480
Glutathione metabolism
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi04148
Efferocytosis
Module
mdi_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
METDI1141
09106 Metabolism of other amino acids
00480 Glutathione metabolism
METDI1141
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
METDI1141
Enzymes [BR:
mdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
METDI1141
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Paralog
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Ribosomal_L27e
Motif
Other DBs
NCBI-ProteinID:
CAX22758
UniProt:
C7CE54
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All DBs
Position
complement(1049345..1051690)
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AA seq
781 aa
AA seq
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MDFHRRFTVLMCTPAFDPDDLEGARVDQIVAAVEKRGFEVVRARRVEDASIAVQTDSAVG
CLVVDWGKRGLEGKAAALIDMMRKRGLEMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARGLVSRVTQYADTLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKVVL
GSLVAEDDLVLFDRNNHKAAHHGALLLAGGIPIFLETDRNAYGLIGPIYHEALDEGRIRE
KIRDNPLVKDREAWRKERPFRCAVIEQCTYDGTIYDAQAIVERIGHLCDYILFDEAWAGF
MKFHPLYQRRFAMGLTGLDETSPGIIATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPIFASLDVGAQMMKGRSGVVLWDDTIRLGIEWRKKARAIRKEF
EEREADPKRRWFFDPFVPDVVKGPEGTEIPWESVPTDALAADARYWELTPGAAWHGFTHV
APGFAITDPNKLTVLTPGFDRKTGAYAEHGVPAPIVAQYLRENRIVPEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVPLEEAMPEFVARRPKRYRGVRLRDLCADYHAFHR
ESGTSALQRKQFMPEHLPEMVMAPKAAAQMLTRNRVDYVPIAEAEGRVATTLMLVYPPGI
GTVLPGERLDERAKPMLDYFKMFEAAANLFPGFEAEIQGVYRESDPDGRIRFHTYVLREG
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaccgccgcttcaccgtgctgatgtgcacgcccgccttcgatccggatgat
ctggagggcgcgcgcgtcgatcagatcgtcgcggcggtggagaagcgcggcttcgaggtg
gtgcgggcgcggcgcgtcgaggatgcctcgatcgcggtgcagaccgactccgccgtcggc
tgcctcgtggtggattggggcaagcgcggactcgagggcaaggcggccgcgctcatcgac
atgatgcgcaagcgcggcctggagatgccgatcgtcatcatggtccgccgcaagcggctg
gaggacatcccggtcgagctgctcgacttcatcgacggctacatcttcctggcagaagaa
acgccggaattcatcgcccgcggtctcgtctcccgcgtgacgcagtatgccgacacgctg
aagacgccgttcttcggcgcgctcgtcgattacgccgaggagggcaaccagctctggacc
tgccccggccataacggcggcatcttctacaaccgctcgccgatcggccgcatcttcgtc
gagcatctcggcgaggcgatctttcgcgatgacctcgacaactcggtgctcgatctcggc
gacctgctgacccacgagggacccgcgctcaaggcgcagaaggaagcggcaaagatcttc
ggggcggaaaagacctatttcgtcctcaacggcacctcggcctcgaacaaggtcgtgctg
ggctcgctggtggccgaggacgatctcgtcctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgctgctggccggcggcatcccgattttcctcgagaccgaccgtaac
gcttacggcctgatcgggccgatctaccatgaggcgctcgacgaggggcgcatccgcgag
aagatccgcgacaacccgctcgtgaaggacagggaggcgtggcgcaaggagcgcccgttc
cgctgcgccgtgatcgagcaatgcacctatgacggcacgatctacgacgcgcaggcgatc
gtcgagcgcatcggccacctgtgcgactacatcctgttcgacgaggcctgggcgggcttc
atgaagttccacccgctctaccagcgccgcttcgccatgggcctgaccgggctcgacgag
acttcgccgggcatcatcgccacgcaatcgacccacaagcagctcgccagcttctcccag
gcctcgcagatccacacccgcgacgggcatatccgcggccagacccggcgggtcgagcac
aagcgcctgaacgagagcttcctcgtccacgcctcgacctcgccgttctacccgatcttc
gcctcgctcgatgtcggcgcgcagatgatgaagggccgctccggcgtcgtgctgtgggac
gacacgatccgcctcggcatcgagtggcgcaagaaggcccgcgccatccgcaaggagttc
gaggagcgcgaggccgacccgaagcggcgctggttcttcgaccccttcgtgcccgacgtg
gtgaaggggcccgagggcacggaaatcccgtgggaatccgtgccgaccgacgccctggcc
gccgacgcccgctactgggagctgacgccgggcgcggcgtggcacggcttcacccatgtc
gcgccgggctttgccatcaccgaccccaacaagctcaccgtgctcacccccggcttcgac
cggaagacgggggcctatgccgagcacggcgtgccggcgccgatcgtcgcgcaatacctg
cgcgagaaccggatcgtcccggagaagaacgacctcaactcgctgctcttcctgctgacg
ccgggcgtcgagtcgtcgaaggcgggcacgctcatctccggcctcgtcgccttcaagcgg
ctgcacgacgacaacgtgccgctcgaagaggcgatgccggaattcgtggcacgccggccc
aagcgctaccgcggcgtgcgcctgcgcgacctctgcgccgattaccacgccttccaccgc
gagtcgggcacctcggcgctccagcgcaagcagttcatgcccgagcacctgccggagatg
gtgatggcgcccaaggccgccgcgcagatgctgacccgcaaccgggtcgattacgtgccg
atcgcggaggccgaggggcgcgtcgccacgaccctgatgctggtctatccgcccggcatc
ggcaccgtgctgcccggcgagcgcctcgacgagcgggccaagcccatgctcgactatttc
aagatgttcgaggcggccgccaacctgttccccggcttcgaggccgagatccagggcgtc
taccgtgagagcgacccggacgggcgcatccgcttccacacctacgtcctgcgcgagggc
gcctga
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