Methylorubrum extorquens DM4: METDI2810
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Entry
METDI2810 CDS
T00947
Name
(GenBank) putative ornithine/diaminopimelate PLP-dependent decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00330
Arginine and proline metabolism
mdi00480
Glutathione metabolism
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi04148
Efferocytosis
Module
mdi_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
METDI2810
09106 Metabolism of other amino acids
00480 Glutathione metabolism
METDI2810
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
METDI2810
Enzymes [BR:
mdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
METDI2810
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CAX24467
UniProt:
C7CIY7
LinkDB
All DBs
Position
complement(2727121..2728287)
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AA seq
388 aa
AA seq
DB search
MTDRIRDYLRARRDLGQDEGPVMVLDLDVVRDNYTAFARALPDTRVFYAVKANPAAEVLR
LLAEMGSCFDTASVAEIEMALAAGATADRVSFGNTIKKERDIVRALKLGIRLFAVDCQAE
VEKIVRASEAAGIAAGEVQVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLHA
YGVSFHVGSQQANTEAWDGALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVET
YGDAIFRALTKHFGNRIPETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIG
KFGGLAETMDESIRYAIRTDHDEDRMAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKV
WIEGAGAYTTTYAAVAFNGFPPLAQIVI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgcatccgcgattacctgcgcgcgcgccgcgacctcggccaggacgagggt
ccggtgatggtcctcgacctcgatgtcgtgcgcgacaactatacggccttcgcccgcgcg
ctgcccgacacccgtgtgttctacgccgtgaaggcgaacccggccgcggaagtgctgcgc
ctgctcgccgagatgggctcctgcttcgacacggcttccgtggccgagatcgagatggcg
ctcgccgccggcgccaccgccgaccgcgtctccttcggcaacaccatcaagaaggagcgc
gacatcgtccgcgcgctcaagctcggcatccgcctgtttgccgtcgattgccaggccgag
gtcgaaaagatcgttcgcgcgagcgaggcggccggcatcgcggccggtgaggtgcaggtg
ttctgccgcatcctctgcgacggcgccggtgcggattggccgctctcgcgcaagttcggc
tgcgagccggagatggcggtgaacgtgctggagcacgctcaccggcacggcctgcatgcc
tacggcgtctcgttccatgtcggttcgcagcaggccaacacggaagcctgggacggggcg
ctcgcctccgcctccgagatcttccgtgaatgcgcgcttcgcggcatcggcctgtcgatg
gtcaacctcggcggcggcttcccgaccaagtacctcaagcaggtgccgggcgtggaaacc
tacggcgacgcgatcttccgcgcgctcaccaagcatttcggcaaccgcatcccggagacg
atcatcgagccgggccgcggcatggtcggcaatgccggcctgatcgaggccgaggtcgtg
ctcgtctccaagaagtcggaggccgaggacgaggtgcgctgggtctatctcgacatcggc
aagttcggtgggctggccgagaccatggacgagtcgatccgctacgcaatccgcaccgac
cacgacgaggaccgcatggcgccctgcgtcgtcgccggcccgacctgcgattcggtcgac
gtgctctacgagaagaaccactacccgctgccggtctccctctcgatcggcgacaaggtg
tggatcgagggcgcgggcgcctacaccacgacctacgcggcggtcgccttcaacggcttc
ccgcccctcgcgcagatcgtgatctga
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