Methylorubrum extorquens DM4: METDI3554
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Entry
METDI3554 CDS
T00947
Symbol
pdhB
Name
(GenBank) pyruvate dehydrogenase E1 beta subunit
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00010
Glycolysis / Gluconeogenesis
mdi00020
Citrate cycle (TCA cycle)
mdi00620
Pyruvate metabolism
mdi00785
Lipoic acid metabolism
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01120
Microbial metabolism in diverse environments
mdi01200
Carbon metabolism
mdi01210
2-Oxocarboxylic acid metabolism
Module
mdi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
METDI3554 (pdhB)
00020 Citrate cycle (TCA cycle)
METDI3554 (pdhB)
00620 Pyruvate metabolism
METDI3554 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
METDI3554 (pdhB)
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
METDI3554 (pdhB)
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
DUF1246
QRPTase_N
Motif
Other DBs
NCBI-ProteinID:
CAX25196
UniProt:
C7C8Q5
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All DBs
Position
3490711..3492159
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AA seq
482 aa
AA seq
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MATDILMPALSPTMEEGKLAKWLKKEGDPVKAGDILAEIETDKATMEVEAIDEGVLAKIL
VADGTENVAVNTPIAIIAEEGEDVAAAAASGGKAKPDGAAGGTPAPTPDMQAEGMADTAA
ATAKTGDDAQKAPASPAIITNKAPDPVMEEFPADSPMKTTTVREALRDAMAEEMRKDDKV
LVMGEEVAEYQGAYKITQGLLQEFGARRVVDTPITEHGFAGIGVGAAFMGLKPIVEFMTF
NFAMQAIDHIINSAAKTLYMSGGQLGCPIVFRGPNGAAARVGAQHSHDYAAWYSNVPGLK
VIAPYTASDAKGLLKAAIRDPNPVIFLENEILYGQSFPVPEIEDFVLPIGKARVHRPGKD
VTIVSFSIGMTYALKAAQALAEEGIEAEVIDLRTIRPMDSATVVESVKKTGRCVCVEEGF
PQSGVGAEIVARLMVDAFDYLDAPVLRVTGKDVPMPYAANLEKLALPSVADVIEAVKSVC
YK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgacatcctgatgcccgccctttctccgaccatggaggagggaaagctcgcc
aaatggctgaaaaaggagggcgatccggtcaaggccggtgacatcctggccgagatcgaa
accgataaggcgacgatggaggtcgaggcgatcgacgagggcgtcctcgccaagatcctg
gttgccgacggcaccgagaacgtcgccgtgaacacgccgatcgcgatcatcgccgaagag
ggcgaggacgtggccgcggcggccgcaagcggcggcaaggccaagccggacggcgccgcc
ggcggtacgccggctccgacccccgacatgcaggccgagggcatggccgacaccgcggcc
gccaccgccaagaccggcgacgatgcgcagaaggccccagcctcgcccgccatcatcacc
aacaaggcgccggacccggtgatggaggagttcccggccgactcgccgatgaagactacg
accgtgcgcgaagccctgcgcgacgccatggccgaggagatgcgcaaggacgacaaggtc
ctcgtgatgggcgaggaggtcgccgagtaccagggcgcctacaagatcacccaaggcctg
cttcaggagtttggcgcgcgccgcgtggtcgatacgccgatcactgagcacggctttgcc
ggcatcggcgtcggtgccgccttcatgggcctcaagcccatcgtcgagttcatgaccttc
aacttcgccatgcaggcgatcgatcacatcatcaactcggcggccaagacgctttacatg
tccggcggccagctcggttgcccgatcgtgttccgcggccccaacggagcggctgctcgc
gtcggcgcccagcacagccacgactacgccgcatggtactcgaacgtgccgggcctcaag
gtgatcgcgccctacaccgcttccgacgccaaaggcctgctcaaagcggcgatccgcgac
cccaacccggtgatcttcctcgagaacgagattctctacggtcagtccttcccggtgccg
gagatcgaggatttcgtcctgccgatcggcaaggcgcgcgtccaccgtccgggcaaggac
gtcaccatcgtctccttctcgatcggcatgacctacgccctcaaggcggcccaggcgctg
gccgaggaaggcatcgaggcggaggtgatcgacctgcgcacgatccgcccgatggacagc
gccacggtggtcgaatcggtgaagaagaccggccgctgcgtctgcgtggaagaaggcttc
ccgcaatcgggtgtcggcgccgagatcgtcgcccgcctgatggtcgatgccttcgactat
ctcgatgcgcccgtcctgcgggtcaccggcaaggacgtgccgatgccctacgcggccaat
ctcgagaagctcgccctgcccagcgtggctgatgtcatcgaggcggtcaaaagcgtctgc
tacaaataa
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