Methylorubrum extorquens DM4: METDI3750
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Entry
METDI3750 CDS
T00947
Symbol
lysS
Name
(GenBank) lysyl tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
METDI3750 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdi01007
]
METDI3750 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdi03016
]
METDI3750 (lysS)
Enzymes [BR:
mdi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
METDI3750 (lysS)
Amino acid related enzymes [BR:
mdi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
METDI3750 (lysS)
Transfer RNA biogenesis [BR:
mdi03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
METDI3750 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
CAX25388
UniProt:
C7CAX6
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All DBs
Position
3690248..3691996
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AA seq
582 aa
AA seq
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MAGAALVQTPKSLLVMSAPLRLDPDILEAAASAAAWPFEEARKLVARLERKPKSEVLFET
GYGPSGLPHIGTFGEVARTSMVRHAFRVLTKDAVPTRLIAFSDDMDGLRKVPDNVPNRER
LAEALNLPLTQVPDPFGTHDSFGAHNNAELRRFLDAFGFDYEFRSATECYKAGIFDDTLR
LVLERYEAVMAIMLPSLRAERSASYSPFLPIHPVTGHVMQVSIDEVRPSAGTIVWRDPAT
NEAYETPVTGGHVKLQWKPDWAMRWVALGVDYEMAGKDLIDSVKLSGQIARALGAEPPEG
FNYELFLDEKGQKISKSKGNGLTIDEWLTYATPESLALFMYNKPREAKRLFFDVIPRNVD
EYDNFLGRFAGQEAKHRLGNPVWHLHAGEPPAVETIDEAGTTLSFGMLLNLVAVANAEDE
AVLWGFIRRYAPNVGPETHPRLAGLVTRALAYYRDFVRPQKQYRAPTEEEAAALRDLSKT
LKEHEGSTDPEALQAIVYEVGRRHFPDLSGKAKSPDGRPGVSKTWFASIYNVLFGEAQGP
RFGSFIALYGVAGTRALIEKALSGALVAEHAAFLESRKAAAA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcggcgcttgtccagaccccgaaaagcttgcttgtgatgtccgcgcccctc
cgcctcgaccccgacattctggaggccgctgcctccgccgccgcctggccgttcgaggag
gcgcgcaagctcgtggcgcggctggagcgcaagcccaagagcgaggttctgttcgagacc
ggctacggcccctcgggcctgccgcatatcggcaccttcggcgaggtggcccgcacctcc
atggtgcgccacgccttccgcgtgctgaccaaggacgcggtgccgacccggctgattgcc
ttctccgacgacatggacgggctgcgcaaagtcccggacaacgtgccgaaccgcgagcgg
ctggccgaggcgctcaacctcccgctgacccaggtgcccgacccgttcggcacgcatgac
agcttcggcgcgcacaacaacgccgagctgcgccgcttcctcgacgccttcggcttcgac
tacgagttccgctcggccaccgagtgctacaaggccggcatcttcgacgacacgctgcgc
ctcgtcttggagcgctacgaggcggtgatggcgatcatgctgccctcgctgcgggccgag
cgctcggcgagctactcgcccttcctgccgatccaccccgtcaccggccacgtgatgcag
gtgtcgatcgacgaggtgcgcccgagcgccggcaccatcgtctggcgcgatccggcgacg
aacgaggcctacgagacgccggtcaccggcggccacgtcaagctgcaatggaagcccgat
tgggcgatgcgctgggtcgcgctcggcgtcgattacgagatggccggcaaggacctgatc
gattcggtcaagctctcgggccagatcgcccgcgccctcggcgccgagccgccggaggga
ttcaactacgaactcttcctcgacgagaagggccagaagatctcgaagtcgaagggcaac
ggcctgaccatcgacgaatggctgacctacgcgacgcccgagtcgctcgcgctgttcatg
tacaacaagccgcgcgaggccaagcgcctgttcttcgacgtgattccgcgcaacgtcgat
gagtacgacaacttcctcggccgttttgccggccaggaggccaagcaccggctcggcaac
ccggtctggcacctgcatgcgggcgaaccgccggccgtcgagaccatcgacgaggccggc
accacgctgtcctttggcatgctcttgaatctcgtggcggtggccaatgccgaggacgag
gcagttttatggggcttcattcgccgctacgccccgaatgtcgggccggaaacgcatccg
cggctcgccggcctcgtgacgcgggcgctcgcctattaccgggacttcgtgcgcccccag
aagcagtaccgcgcgcccaccgaagaggaggctgccgccctgcgcgacctctcgaagacg
ctcaaggagcacgagggctcgaccgatccggaggcgctgcaggccatcgtctacgaagtc
ggccggcgccacttccccgacctgtcgggcaaggccaagagcccggacgggcggcccggc
gtgtcgaagacgtggttcgcctcgatctacaacgtgctgttcggcgaggcccaggggcca
cgcttcggctccttcatcgccctctacggcgtggcgggcacccgggcactgatcgagaag
gcgctgagcggcgcgttggtggccgagcacgcggccttcctcgagagccgcaaggctgcg
gcggcttaa
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